RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ZBTB41Q5SVQ8 909 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 CDCA2Q69YH5 1023 aaPredicted RBP16.79■□□□□ 0.28
MKS1-204ENST00000537529 DPY19L2Q6NUT2 758 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 L3MBTL3Q96JM7 780 aaPredicted RBP16.79■□□□□ 0.28
MKS1-204ENST00000537529 JPH2Q9BR39 696 aaPredicted RBP16.79■□□□□ 0.28
MKS1-204ENST00000537529 R3HDMLQ9H3Y0 253 aa16.79■□□□□ 0.28
MKS1-204ENST00000537529 CNOT8Q9UFF9 292 aaKnown RBP16.79■□□□□ 0.28
MKS1-204ENST00000537529 ZHX1Q9UKY1 873 aaPredicted RBP16.79■□□□□ 0.28
MKS1-204ENST00000537529 UTP11Q9Y3A2 253 aaKnown RBP16.79■□□□□ 0.28
MKS1-204ENST00000537529 CCDC66A2RUB6 948 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 GOLGA6CA6NDK9 693 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 CLDN3O15551 220 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 GOLGA6DP0CG33 693 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 MYBL1P10243 752 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 HARSP12081 509 aaKnown RBP16.78■□□□□ 0.28
MKS1-204ENST00000537529 TBXAS1P24557 533 aaPredicted RBP16.78■□□□□ 0.28
MKS1-204ENST00000537529 MARK3P27448 753 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 HSPA9P38646 679 aaKnown RBP16.78■□□□□ 0.28
MKS1-204ENST00000537529 DRP2Q13474 957 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 TRADDQ15628 312 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 NAA35Q5VZE5 725 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 BRSK2Q8IWQ3 736 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 DHX37Q8IY37 1157 aaKnown RBP16.78■□□□□ 0.28
MKS1-204ENST00000537529 KRT35Q92764 455 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 CCDC113Q9H0I3 377 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 RAB17Q9H0T7 212 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 C2orf40Q9H1Z8 148 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 FAM114A2Q9NRY5 505 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 GOLGA6AQ9NYA3 693 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 CHORDC1Q9UHD1 332 aaPredicted RBP16.78■□□□□ 0.28
MKS1-204ENST00000537529 CNTNAP2Q9UHC6 1331 aa16.78■□□□□ 0.28
MKS1-204ENST00000537529 TTI1O43156 1089 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 TOM1L1O75674 476 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 EPHX2P34913 555 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 CTNNA1P35221 906 aaKnown RBP16.77■□□□□ 0.28
MKS1-204ENST00000537529 LAMTOR4Q0VGL1 99 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 GRM1Q13255 1194 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 Q3C1V9 767 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 WDR78Q5VTH9 848 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 GPAT2Q6NUI2 795 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 TRIM72Q6ZMU5 477 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 FBXO16Q8IX29 292 aaPredicted RBP16.77■□□□□ 0.28
MKS1-204ENST00000537529 SHCBP1Q8NEM2 672 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 FAM76AQ8TAV0 307 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 CD101Q93033 1021 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 SPATA33Q96N06 139 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 ZIM3Q96PE6 472 aa16.77■□□□□ 0.28
MKS1-204ENST00000537529 AVENQ9NQS1 362 aaPredicted RBP16.77■□□□□ 0.28
MKS1-204ENST00000537529 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.77■□□□□ 0.28
MKS1-204ENST00000537529 PRKCBP05771 671 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 CLTAP09496 248 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 UNGP13051 313 aaPredicted RBP16.77■□□□□ 0.27
MKS1-204ENST00000537529 ECHS1P30084 290 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 MARCKSL1P49006 195 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 SLC26A2P50443 739 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 DR1Q01658 176 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 POU5F1Q01860 360 aaKnown RBP16.77■□□□□ 0.27
MKS1-204ENST00000537529 DHX34Q14147 1143 aaKnown RBP16.77■□□□□ 0.27
MKS1-204ENST00000537529 PLCB4Q15147 1175 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 HSDL1Q3SXM5 330 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 SPOPLQ6IQ16 392 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 TRIM50Q86XT4 487 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 SEC14L1Q92503 715 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 LRRC45Q96CN5 670 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 IMPG2Q9BZV3 1241 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 PCDHB4Q9Y5E5 795 aa16.77■□□□□ 0.27
MKS1-204ENST00000537529 IGKV6-21A0A0C4DH24 114 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 FAM187AA6NFU0 413 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 MSCO60682 206 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 ACO1P21399 889 aaKnown RBP16.76■□□□□ 0.27
MKS1-204ENST00000537529 PEX5P50542 639 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 NOP14P78316 857 aaKnown RBP16.76■□□□□ 0.27
MKS1-204ENST00000537529 MAPK6Q16659 721 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 CCDC62Q6P9F0 684 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 WDR49Q8IV35 697 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 MCOLN2Q8IZK6 566 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 IQCKQ8N0W5 287 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 GTF3C2Q8WUA4 911 aaPredicted RBP16.76■□□□□ 0.27
MKS1-204ENST00000537529 TCHPQ9BT92 498 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 APOBEC3GQ9HC16 384 aaKnown RBP16.76■□□□□ 0.27
MKS1-204ENST00000537529 RASAL2Q9UJF2 1139 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 ASB14A6NK59 587 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 ZBTB42B2RXF5 422 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 PHF2O75151 1096 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 POTEJP0CG39 1038 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 SRGAP2CP0DJJ0 459 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 CAPN2P17655 700 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 NSFP46459 744 aaKnown RBP16.76■□□□□ 0.27
MKS1-204ENST00000537529 SNAPC2Q13487 334 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 NCOA4Q13772 614 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 TFDP1Q14186 410 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 PPP1R2P3Q6NXS1 205 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 ADAT2Q7Z6V5 191 aaKnown RBP16.76■□□□□ 0.27
MKS1-204ENST00000537529 RNF149Q8NC42 400 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 OR5B17Q8NGF7 314 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 BTBD6Q96KE9 485 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 ACO2Q99798 780 aaKnown RBP16.76■□□□□ 0.27
MKS1-204ENST00000537529 CELF4Q9BZC1 486 aaKnown RBP16.76■□□□□ 0.27
MKS1-204ENST00000537529 SMARCAD1Q9H4L7 1026 aa16.76■□□□□ 0.27
MKS1-204ENST00000537529 NR2E1Q9Y466 385 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms