RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 ALOX5P09917 674 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 ETS2P15036 469 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 SCNN1BP51168 640 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 PTPN12Q05209 780 aaKnown RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 PPP6R3Q5H9R7 873 aaPredicted RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 METTL16Q86W50 562 aaKnown RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 BORCS5Q969J3 196 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 OLFM1Q99784 485 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 NUP85Q9BW27 656 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 BTBD3Q9Y2F9 522 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 PTPRKQ15262 1439 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 OPLAHO14841 1288 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 FTLP02792 175 aaPredicted RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 OATP04181 439 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 PSMA4P25789 261 aaKnown RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 ANXA13P27216 316 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 CACNB1Q02641 598 aaPredicted RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 CYP4A11Q02928 519 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 TRIM71Q2Q1W2 868 aaKnown RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 FAM45BPQ6NSW5 357 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 SHC4Q6S5L8 630 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 TMC4Q7Z404 712 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 C19orf18Q8NEA5 215 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 FNIP1Q8TF40 1166 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 KCNB2Q92953 911 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 CELF4Q9BZC1 486 aaKnown RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 ZWILCHQ9H900 591 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 ADAM22Q9P0K1 906 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 RSL24D1Q9UHA3 163 aaKnown RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 SPDYE2BA6NHP3 402 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 MAFGO15525 162 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 TPST1O60507 370 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 EFCAB14O75071 495 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 SPDYE6P0CI01 402 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 SRGNP10124 158 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 ALOX12P18054 663 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 MAGEA4P43358 317 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 TP53BP2Q13625 1128 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 LAMC2Q13753 1193 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 CTTNQ14247 550 aaKnown RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 BNIPLQ7Z465 357 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 RHOT1Q8IXI2 618 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 KBTBD2Q8IY47 623 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 PLBD2Q8NHP8 589 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 CDC26Q8NHZ8 85 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 SKA2Q8WVK7 121 aaPredicted RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 RSPH1Q8WYR4 309 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 F8W031 263 aaPredicted RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 AREL1O15033 823 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 THRAP10827 490 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 USP46P62068 366 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 ZNF200P98182 395 aaPredicted RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 FMR1Q06787 632 aaKnown RBP eCLIP12.41□□□□□ -0.422e-7■■■■■ 26.8
POLR1B-216ENST00000537335 XRCC4Q13426 336 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 RASA2Q15283 850 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 SLC5A9Q2M3M2 681 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 MIS18BP1Q6P0N0 1132 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 ADSSL1Q8N142 457 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 RTL3Q8N8U3 475 aaKnown RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 NEUROG2Q9H2A3 272 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 EML4Q9HC35 981 aaKnown RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 HACD3Q9P035 362 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 NEU2Q9Y3R4 380 aa12.41□□□□□ -0.42
POLR1B-216ENST00000537335 RPAP1Q9BWH6 1393 aaPredicted RBP12.41□□□□□ -0.42
POLR1B-216ENST00000537335 ACEP12821 1306 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 ATXN2Q99700 1313 aaKnown RBP12.4□□□□□ -0.42
POLR1B-216ENST00000537335 TMEM247A6NEH6 219 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 POLR2EP19388 210 aaKnown RBP12.4□□□□□ -0.42
POLR1B-216ENST00000537335 BNC2Q6ZN30 1099 aaPredicted RBP12.4□□□□□ -0.42
POLR1B-216ENST00000537335 ARHGEF19Q8IW93 802 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 EPS8L3Q8TE67 593 aaKnown RBP12.4□□□□□ -0.42
POLR1B-216ENST00000537335 TMEM206Q9H813 350 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 SH2B2O14492 632 aaPredicted RBP12.4□□□□□ -0.42
POLR1B-216ENST00000537335 ITGA6P23229 1130 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 POU5F1BQ06416 359 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 STX5Q13190 355 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 SPANXN2Q5MJ10 180 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 RBM44Q6ZP01 1051 aaKnown RBP12.4□□□□□ -0.42
POLR1B-216ENST00000537335 UBASH3BQ8TF42 649 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 ACCSQ96QU6 501 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 TSPAN18Q96SJ8 248 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 PVALEFA0A1B0GWK0 134 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 USP17L12C9JPN9 530 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 USP17L21D6R901 530 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 RNF103O00237 685 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 SNX2O60749 519 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 PGM3O95394 542 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 PCP11498 1178 aaKnown RBP12.4□□□□□ -0.42
POLR1B-216ENST00000537335 SERPINB9P50453 376 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 TAF12Q16514 161 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 RASGRP4Q8TDF6 673 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 HPS1Q92902 700 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 TATDN2Q93075 761 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 NLRP3Q96P20 1036 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 SHCBP1LQ9BZQ2 653 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 CACNA2D2Q9NY47 1150 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 SPEF1Q9Y4P9 236 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 EVPLLA8MZ36 301 aa12.4□□□□□ -0.42
POLR1B-216ENST00000537335 GNPATO15228 680 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms