RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 SRRM3A6NNA2 597 aaPredicted RBP13.78□□□□□ -0.2
TRIM25-202ENST00000537230 MAFGO15525 162 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 CFHP08603 1231 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 PDE6CP51160 858 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 SF3A3Q12874 501 aaKnown RBP eCLIP13.78□□□□□ -0.22e-6■■□□□ 14.5
TRIM25-202ENST00000537230 SEZ6Q53EL9 994 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 DUPD1Q68J44 220 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 JAMLQ86YT9 394 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 SLC17A8Q8NDX2 589 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 MDM1Q8TC05 714 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 TMC2Q8TDI7 906 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 SEC16BQ96JE7 1060 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 ATP6V0A4Q9HBG4 840 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 GGA2Q9UJY4 613 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 SNX24Q9Y343 169 aa13.78□□□□□ -0.2
TRIM25-202ENST00000537230 BYSLQ13895 437 aaKnown RBP13.77□□□□□ -0.2
TRIM25-202ENST00000537230 EMC2Q15006 297 aa13.77□□□□□ -0.2
TRIM25-202ENST00000537230 BRDTQ58F21 947 aaPredicted RBP13.77□□□□□ -0.2
TRIM25-202ENST00000537230 TREML2Q5T2D2 321 aa13.77□□□□□ -0.2
TRIM25-202ENST00000537230 SEPT14Q6ZU15 432 aa13.77□□□□□ -0.2
TRIM25-202ENST00000537230 MCPH1Q8NEM0 835 aa13.77□□□□□ -0.2
TRIM25-202ENST00000537230 HVCN1Q96D96 273 aa13.77□□□□□ -0.2
TRIM25-202ENST00000537230 ERP44Q9BS26 406 aa13.77□□□□□ -0.2
TRIM25-202ENST00000537230 ZDHHC18Q9NUE0 388 aa13.77□□□□□ -0.2
TRIM25-202ENST00000537230 ATP8A1Q9Y2Q0 1164 aa13.77□□□□□ -0.2
TRIM25-202ENST00000537230 CYP1A2P05177 515 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 SUPT20HL2P0C7V6 817 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 OAZ1P54368 228 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 TCEAL1Q15170 157 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 SUPT20HL1Q3ZLR7 823 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 CXorf56Q9H5V9 222 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 C17orf75Q9HAS0 396 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 SYNGAP1Q96PV0 1343 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 TTLL13PA6NNM8 815 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 CHUKO15111 745 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 SPOPO43791 374 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 PTGIRP43119 386 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 KCNJ1P48048 391 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 POLGP54098 1239 aaPredicted RBP13.77□□□□□ -0.21
TRIM25-202ENST00000537230 PLTPP55058 493 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 TDRD10Q5VZ19 366 aaKnown RBP13.77□□□□□ -0.21
TRIM25-202ENST00000537230 CRELD2Q6UXH1 353 aaPredicted RBP13.77□□□□□ -0.21
TRIM25-202ENST00000537230 C15orf39Q6ZRI6 1047 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 FBXO25Q8TCJ0 367 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 CPA5Q8WXQ8 436 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 HAUS2Q9NVX0 235 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 DIS3Q9Y2L1 958 aaKnown RBP13.77□□□□□ -0.21
TRIM25-202ENST00000537230 AFG3L2Q9Y4W6 797 aa13.77□□□□□ -0.21
TRIM25-202ENST00000537230 NFASCO94856 1347 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 MIF4GDA9UHW6 222 aaKnown RBP13.76□□□□□ -0.21
TRIM25-202ENST00000537230 KIAA0391O15091 583 aaKnown RBP13.76□□□□□ -0.21
TRIM25-202ENST00000537230 MTA2O94776 668 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 GLRA2P23416 452 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 LIG4P49917 911 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 DRP2Q13474 957 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 MTMR3Q13615 1198 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 ANKRD20A8PQ5CZ79 823 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 ZDHHC24Q6UX98 284 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 UBL4BQ8N7F7 174 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 VTI1AQ96AJ9 217 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 FMO2Q99518 471 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 EPB41L4BQ9H329 900 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 GTF3C4Q9UKN8 822 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 PNMA2Q9UL42 364 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 GOLGA6L10A0A0M3HER8 536 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 ATP2A1O14983 1001 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 TNNI1P19237 187 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 GARTP22102 1010 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 CDR1P51861 262 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 IFFO1Q0D2I5 559 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 XKR3Q5GH77 459 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 AGBL2Q5U5Z8 902 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 CACNA2D3Q8IZS8 1091 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 IFT74Q96LB3 600 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 RPS6KC1Q96S38 1066 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 FAM114A2Q9NRY5 505 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 ANKFY1Q9P2R3 1169 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 PTPN22Q9Y2R2 807 aa13.76□□□□□ -0.21
TRIM25-202ENST00000537230 LRRIQ4A6NIV6 560 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 C19orf81C9J6K1 198 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 VNN1O95497 513 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 RPL21P46778 160 aaKnown RBP13.75□□□□□ -0.21
TRIM25-202ENST00000537230 SIX1Q15475 284 aaPredicted RBP13.75□□□□□ -0.21
TRIM25-202ENST00000537230 GNPTABQ3T906 1256 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 CPLX4Q7Z7G2 160 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 FUKQ8N0W3 1084 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 NAP1L3Q99457 506 aaPredicted RBP13.75□□□□□ -0.21
TRIM25-202ENST00000537230 HERPUD2Q9BSE4 406 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 TARS2Q9BW92 718 aaKnown RBP13.75□□□□□ -0.21
TRIM25-202ENST00000537230 TXLNGYQ9BZA5 131 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 GRHL1Q9NZI5 618 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 PTPRFP10586 1907 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 UMODL1Q5DID0 1318 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 O00370 1275 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 PHF2O75151 1096 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 CAND2O75155 1236 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 HLA-DRAP01903 254 aa13.75□□□□□ -0.21
TRIM25-202ENST00000537230 SHBGP04278 402 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms