RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 MS4A14Q96JA4 679 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 ADPGKQ9BRR6 497 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 OLFML3Q9NRN5 406 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 FLRT1Q9NZU1 646 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 MYH11P35749 1972 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 LTBP1Q14766 1721 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 THAP12O43422 761 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 ZRANB2O95218 330 aaKnown RBP eCLIP8.81□□□□□ -1
ABCA4-207ENST00000536513 SNAI1O95863 264 aaPredicted RBP8.81□□□□□ -1
ABCA4-207ENST00000536513 ATP1A1P05023 1023 aaKnown RBP8.81□□□□□ -1
ABCA4-207ENST00000536513 ADSSP30520 456 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 SLC7A5Q01650 507 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 PDXDC1Q6P996 788 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 LRRC31Q6UY01 552 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 RPUSD2Q8IZ73 545 aaKnown RBP8.81□□□□□ -1
ABCA4-207ENST00000536513 OR5B17Q8NGF7 314 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 SPIRE2Q8WWL2 714 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 ABHD16BQ9H3Z7 469 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 SEL1LQ9UBV2 794 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 PCDHA2Q9Y5H9 948 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 MRFAP1Q9Y605 127 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 SAR1BQ9Y6B6 198 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 IGSF9BQ9UPX0 1349 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 GOLGA6L10A0A0M3HER8 536 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 SMIM23A6NLE4 172 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 SPOPO43791 374 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 GGCXP38435 758 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 VPS41P49754 854 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 YARSP54577 528 aaKnown RBP8.81□□□□□ -1
ABCA4-207ENST00000536513 LAMC2Q13753 1193 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 GRIK4Q16099 956 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 EDRF1Q3B7T1 1238 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 HYIQ5T013 277 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 ATF7IP2Q5U623 682 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 KLHDC7AQ5VTJ3 777 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 OLFML2BQ68BL8 750 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 ELOA2Q8IYF1 753 aaPredicted RBP8.81□□□□□ -1
ABCA4-207ENST00000536513 ATP8B4Q8TF62 1192 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 FAM118BQ9BPY3 351 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 TMEM117Q9H0C3 514 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 FAM184BQ9ULE4 1060 aa8.81□□□□□ -1
ABCA4-207ENST00000536513 RPTORQ8N122 1335 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 RBM47A0AV96 593 aaKnown RBP8.8□□□□□ -1
ABCA4-207ENST00000536513 TLDC2A0PJX2 215 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 TMEM88BA6NKF7 163 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 TREHO43280 583 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 PDGFRBP09619 1106 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 MAPK4P31152 587 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 WHAMMP3Q1A5X7 153 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 PHLDB3Q6NSJ2 640 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 SLC47A2Q86VL8 602 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 RASAL3Q86YV0 1011 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 SH3TC2Q8TF17 1288 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 RPF1Q9H9Y2 349 aaKnown RBP8.8□□□□□ -1
ABCA4-207ENST00000536513 KLHL11Q9NVR0 708 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 CAPN6Q9Y6Q1 641 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 SDK1Q7Z5N4 2213 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 PALMO75781 387 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 UPP2O95045 317 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 SGPL1O95470 568 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 NPTXRO95502 500 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 ITGBL1O95965 494 aaPredicted RBP8.8□□□□□ -1
ABCA4-207ENST00000536513 TFDP1Q14186 410 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 FAM110CQ1W6H9 321 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 KRT39Q6A163 491 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 FRMD5Q7Z6J6 570 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 PALB2Q86YC2 1186 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 IFNL1Q8IU54 200 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.8□□□□□ -1
ABCA4-207ENST00000536513 FBXL13Q8NEE6 735 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 C11orf70Q9BRQ4 267 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 AP1M1Q9BXS5 423 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 MRPL4Q9BYD3 311 aaKnown RBP8.8□□□□□ -1
ABCA4-207ENST00000536513 TAS2R14Q9NYV8 317 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 TRIM17Q9Y577 477 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 TIMM13Q9Y5L4 95 aaPredicted RBP8.8□□□□□ -1
ABCA4-207ENST00000536513 MANSC4A6NHS7 340 aaPredicted RBP8.8□□□□□ -1
ABCA4-207ENST00000536513 EIF4E1BA6NMX2 242 aaKnown RBP8.8□□□□□ -1
ABCA4-207ENST00000536513 M0QZ92 97 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 MYO1FO00160 1098 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 STK25O00506 426 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 CHUKO15111 745 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 HBP1O60381 514 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 GRAP2O75791 330 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 HLA-DRAP01903 254 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 H2AFZP0C0S5 128 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 PRKAR2AP13861 404 aaKnown RBP8.8□□□□□ -1
ABCA4-207ENST00000536513 SCP2P22307 547 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 THPOP40225 353 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 C2orf54Q08AI8 447 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 TBX2Q13207 712 aaPredicted RBP8.8□□□□□ -1
ABCA4-207ENST00000536513 PPP1R7Q15435 360 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 SKIV2LQ15477 1246 aaKnown RBP8.8□□□□□ -1
ABCA4-207ENST00000536513 H2AFVQ71UI9 128 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 ZNF571Q7Z3V5 609 aaPredicted RBP8.8□□□□□ -1
ABCA4-207ENST00000536513 SEMA4DQ92854 862 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 ACSF2Q96CM8 615 aaPredicted RBP8.8□□□□□ -1
ABCA4-207ENST00000536513 KIF12Q96FN5 646 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 CDHR5Q9HBB8 845 aa8.8□□□□□ -1
ABCA4-207ENST00000536513 GOLGA2P5Q9HBQ8 144 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms