RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SPATA32Q96LK8 384 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 S1PR5Q9H228 398 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 BLZF1Q9H2G9 400 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 GDPD2Q9HCC8 539 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 SEL1LQ9UBV2 794 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 TUBGCP4Q9UGJ1 667 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 USP15Q9Y4E8 981 aaPredicted RBP14.37□□□□□ -0.11
PRKDC-206ENST00000536429 MYH11P35749 1972 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 A0A1B0GVL5 298 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 I3L4J1 428 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 TNFRSF10AO00220 468 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 OGTO15294 1046 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 B3GAT3O94766 335 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 CLTAP09496 248 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 RPL17P18621 184 aaKnown RBP14.36□□□□□ -0.11
PRKDC-206ENST00000536429 CLCN4P51793 760 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 GUCY2FP51841 1108 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 SMAD2Q15796 467 aaKnown RBP14.36□□□□□ -0.11
PRKDC-206ENST00000536429 ENOX2Q16206 610 aaKnown RBP14.36□□□□□ -0.11
PRKDC-206ENST00000536429 USP41Q3LFD5 358 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 TPRNQ4KMQ1 711 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 L1TD1Q5T7N2 865 aaKnown RBP14.36□□□□□ -0.11
PRKDC-206ENST00000536429 FAM171A1Q5VUB5 890 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 PRSS55Q6UWB4 352 aaPredicted RBP14.36□□□□□ -0.11
PRKDC-206ENST00000536429 ZSWIM2Q8NEG5 633 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 RIN2Q8WYP3 895 aaPredicted RBP14.36□□□□□ -0.11
PRKDC-206ENST00000536429 CASP10Q92851 521 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 KHSRPQ92945 711 aaKnown RBP eCLIP14.36□□□□□ -0.11
PRKDC-206ENST00000536429 MSTO1Q9BUK6 570 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 CUEDC2Q9H467 287 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 RXFP1Q9HBX9 757 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 OLFML3Q9NRN5 406 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 FAM13BQ9NYF5 915 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 STK39Q9UEW8 545 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 SERTAD1Q9UHV2 236 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 KCNH3Q9ULD8 1083 aa14.36□□□□□ -0.11
PRKDC-206ENST00000536429 SF3B1O75533 1304 aaKnown RBP eCLIP14.36□□□□□ -0.11
PRKDC-206ENST00000536429 TTC26A0AVF1 554 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 LACTBL1A8MY62 500 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 PODXLO00592 558 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 ACTN4O43707 911 aaKnown RBP14.35□□□□□ -0.11
PRKDC-206ENST00000536429 PRPF6O94906 941 aaKnown RBP14.35□□□□□ -0.11
PRKDC-206ENST00000536429 WEE2P0C1S8 567 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 PFKFB1P16118 471 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 SCP2P22307 547 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 KLRC2P26717 231 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 AFMP43652 599 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 BRCC3P46736 316 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 ACOT2P49753 483 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 ASIC1P78348 528 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 ZP2Q05996 745 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 KIAA1841Q6NSI8 718 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 DCLRE1AQ6PJP8 1040 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 GLYCTKQ8IVS8 523 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 CCDC65Q8IXS2 484 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 TMEM87AQ8NBN3 555 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 SUSD6Q92537 303 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 C7orf25Q9BPX7 421 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 EMILIN2Q9BXX0 1053 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 CPSF3Q9UKF6 684 aaKnown RBP14.35□□□□□ -0.11
PRKDC-206ENST00000536429 STYXL1Q9Y6J8 313 aa14.35□□□□□ -0.11
PRKDC-206ENST00000536429 TDRD15B5MCY1 1934 aaKnown RBP14.35□□□□□ -0.11
PRKDC-206ENST00000536429 FSD2A1L4K1 749 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 TMEM189-UBE2V1I3L0A0 370 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 ADAM12O43184 909 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 CMA1P23946 247 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 HOXD13P35453 343 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 CUL4BQ13620 913 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 RARS2Q5T160 578 aaKnown RBP14.34□□□□□ -0.11
PRKDC-206ENST00000536429 ADALQ6DHV7 355 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 CNNM4Q6P4Q7 775 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 CRELD2Q6UXH1 353 aaPredicted RBP14.34□□□□□ -0.11
PRKDC-206ENST00000536429 CEP57Q86XR8 500 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 GJD3Q8N144 294 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 LNX1Q8TBB1 728 aaPredicted RBP14.34□□□□□ -0.11
PRKDC-206ENST00000536429 HVCN1Q96D96 273 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 FAM212AQ96EL1 285 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 KIF12Q96FN5 646 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 FBXL18Q96ME1 805 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 ACCSQ96QU6 501 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 TTPALQ9BTX7 342 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 GOLPH3LQ9H4A5 285 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 RPF1Q9H9Y2 349 aaKnown RBP14.34□□□□□ -0.11
PRKDC-206ENST00000536429 SLC38A7Q9NVC3 462 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 AGO2Q9UKV8 859 aaKnown RBP14.34□□□□□ -0.11
PRKDC-206ENST00000536429 HPSEQ9Y251 543 aa14.34□□□□□ -0.11
PRKDC-206ENST00000536429 PPEF2O14830 753 aa14.33□□□□□ -0.12
PRKDC-206ENST00000536429 ADRB2P07550 413 aa14.33□□□□□ -0.12
PRKDC-206ENST00000536429 SPATA31D3P0C874 917 aa14.33□□□□□ -0.12
PRKDC-206ENST00000536429 SRGAP2BP0DMP2 458 aa14.33□□□□□ -0.12
PRKDC-206ENST00000536429 TKTP29401 623 aaKnown RBP14.33□□□□□ -0.12
PRKDC-206ENST00000536429 ABCD1P33897 745 aa14.33□□□□□ -0.12
PRKDC-206ENST00000536429 NDUFA8P51970 172 aa14.33□□□□□ -0.12
PRKDC-206ENST00000536429 WNT7BP56706 349 aa14.33□□□□□ -0.12
PRKDC-206ENST00000536429 PPP2R3AQ06190 1150 aa14.33□□□□□ -0.12
PRKDC-206ENST00000536429 EHHADHQ08426 723 aa14.33□□□□□ -0.12
PRKDC-206ENST00000536429 ZBTB6Q15916 424 aa14.33□□□□□ -0.12
PRKDC-206ENST00000536429 RSPO2Q6UXX9 243 aaPredicted RBP14.33□□□□□ -0.12
PRKDC-206ENST00000536429 SPATA31D4Q6ZUB0 917 aa14.33□□□□□ -0.12
PRKDC-206ENST00000536429 PALB2Q86YC2 1186 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms