RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 VPS16Q9H269 839 aa7.04□□□□□ -1.28
CDCA3-205ENST00000535871 PDZD7Q9H5P4 517 aa7.04□□□□□ -1.28
CDCA3-205ENST00000535871 RPF1Q9H9Y2 349 aaKnown RBP7.04□□□□□ -1.28
CDCA3-205ENST00000535871 POLD4Q9HCU8 107 aa7.04□□□□□ -1.28
CDCA3-205ENST00000535871 ERVK-5Q9HDB9 667 aa7.04□□□□□ -1.28
CDCA3-205ENST00000535871 C1orf112Q9NSG2 853 aa7.04□□□□□ -1.28
CDCA3-205ENST00000535871 RBAKQ9NYW8 714 aaPredicted RBP7.04□□□□□ -1.28
CDCA3-205ENST00000535871 CEP72Q9P209 647 aa7.04□□□□□ -1.28
CDCA3-205ENST00000535871 CAPN11Q9UMQ6 739 aa7.04□□□□□ -1.28
CDCA3-205ENST00000535871 PLAGL2Q9UPG8 496 aa7.04□□□□□ -1.28
CDCA3-205ENST00000535871 BZW2Q9Y6E2 419 aaKnown RBP7.04□□□□□ -1.28
CDCA3-205ENST00000535871 CDY2AQ9Y6F7 541 aa7.04□□□□□ -1.28
CDCA3-205ENST00000535871 A0A0U1RQF3 1178 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 TTC26A0AVF1 554 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 EFCAB14O75071 495 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 GFPT2O94808 682 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 EOMESO95936 686 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 CHRNA1P02708 482 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 TFRCP02786 760 aaKnown RBP7.03□□□□□ -1.28
CDCA3-205ENST00000535871 PFKMP08237 780 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 CCDC172P0C7W6 258 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 CKBP12277 381 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 KCNE1P15382 129 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 TRIM21P19474 475 aaKnown RBP7.03□□□□□ -1.28
CDCA3-205ENST00000535871 CYP3A5P20815 502 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 ATICP31939 592 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 THPOP40225 353 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 MXI1P50539 228 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 YARSP54577 528 aaKnown RBP7.03□□□□□ -1.28
CDCA3-205ENST00000535871 GCNT1Q02742 428 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 MTFR1Q15390 333 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 MEA1Q16626 185 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 PROX2Q3B8N5 592 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 EPC2Q52LR7 807 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 SWT1Q5T5J6 900 aaKnown RBP7.03□□□□□ -1.28
CDCA3-205ENST00000535871 GPR153Q6NV75 609 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 ALKAL1Q6UXT8 129 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 NECAB2Q7Z6G3 386 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 CBWD2Q8IUF1 395 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 FBXL13Q8NEE6 735 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 OR8K1Q8NGG5 319 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 ACAP3Q96P50 834 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 DNAJC7Q99615 494 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 OSMRQ99650 979 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 CGRRF1Q99675 332 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 FAM213AQ9BRX8 229 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 TMX1Q9H3N1 280 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 ELAC1Q9H777 363 aaKnown RBP7.03□□□□□ -1.28
CDCA3-205ENST00000535871 KCND1Q9NSA2 647 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 TAB2Q9NYJ8 693 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 CNTN3Q9P232 1028 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 ANKFY1Q9P2R3 1169 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 GIT1Q9Y2X7 761 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 LUC7L2Q9Y383 392 aaKnown RBP7.03□□□□□ -1.28
CDCA3-205ENST00000535871 CITO14578 2027 aa7.03□□□□□ -1.28
CDCA3-205ENST00000535871 ATP8B3O60423 1300 aa7.02□□□□□ -1.28
CDCA3-205ENST00000535871 LRRIQ3A6PVS8 624 aaPredicted RBP7.02□□□□□ -1.29
CDCA3-205ENST00000535871 AKR1B15C9JRZ8 316 aaPredicted RBP7.02□□□□□ -1.29
CDCA3-205ENST00000535871 TEX33O43247 280 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 MFAP3LO75121 409 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 CXCL10P02778 98 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 C4BPAP04003 597 aaKnown RBP7.02□□□□□ -1.29
CDCA3-205ENST00000535871 GYPCP04921 128 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 EDN1P05305 212 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 STAG3L1P0CL83 205 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 ZSCAN20P17040 1043 aaPredicted RBP7.02□□□□□ -1.29
CDCA3-205ENST00000535871 TBXAS1P24557 533 aaPredicted RBP7.02□□□□□ -1.29
CDCA3-205ENST00000535871 PON1P27169 355 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 DEKP35659 375 aaKnown RBP7.02□□□□□ -1.29
CDCA3-205ENST00000535871 MATR3P43243 847 aaKnown RBP eCLIP7.02□□□□□ -1.29
CDCA3-205ENST00000535871 FAM189BP81408 668 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 ZNF200P98182 395 aaPredicted RBP7.02□□□□□ -1.29
CDCA3-205ENST00000535871 MYL7Q01449 175 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 PAK2Q13177 524 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 DSC3Q14574 896 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 SYCP1Q15431 976 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 ENOX2Q16206 610 aaKnown RBP7.02□□□□□ -1.29
CDCA3-205ENST00000535871 DCAF17Q5H9S7 520 aaPredicted RBP7.02□□□□□ -1.29
CDCA3-205ENST00000535871 C1orf220Q5T0J3 134 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 KLHDC7AQ5VTJ3 777 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 TCERG1LQ5VWI1 586 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 TRIM65Q6PJ69 517 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 TRAF7Q6Q0C0 670 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 SV2AQ7L0J3 742 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 LRRC8DQ7L1W4 858 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 UBE2Q1Q7Z7E8 422 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 FAM228AQ86W67 206 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 LRRC8AQ8IWT6 810 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 CCDC170Q8IYT3 715 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 EHBP1Q8NDI1 1231 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 NEK11Q8NG66 645 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 LMO3Q8TAP4 145 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 SPATA18Q8TC71 538 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 UBE2Q2Q8WVN8 375 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 TMEM40Q8WWA1 233 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 PGBD4Q96DM1 585 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 TRIM44Q96DX7 344 aaPredicted RBP7.02□□□□□ -1.29
CDCA3-205ENST00000535871 ANKRD36BP1Q96IX9 119 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 STK33Q9BYT3 514 aa7.02□□□□□ -1.29
CDCA3-205ENST00000535871 IMPG2Q9BZV3 1241 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms