RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 TP53P04637 393 aaPredicted RBP6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 GYPCP04921 128 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 MYL1P05976 194 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ATP2B1P20020 1258 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 CD247P20963 164 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 KCNC1P48547 511 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 GNAQP50148 359 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 COPB1P53618 953 aaKnown RBP6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ADKP55263 362 aaKnown RBP6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 CORO7P57737 925 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 NLRP5P59047 1200 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 FAM193AP78312 1265 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 CBX1P83916 185 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 SPAG1Q07617 926 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 RBL2Q08999 1139 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ORC2Q13416 577 aaPredicted RBP6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 KRT31Q15323 416 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ERCC6LQ2NKX8 1250 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 COBLL1Q53SF7 1204 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 WWC2Q6AWC2 1192 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 PIK3AP1Q6ZUJ8 805 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 C16orf86Q6ZW13 317 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 NBPF5PQ86XG9 351 aaPredicted RBP6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 CERS3Q8IU89 383 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ADSSL1Q8N142 457 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 FIBCD1Q8N539 461 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 CCDC34Q96HJ3 373 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 LZTS2Q9BRK4 669 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 TMEM60Q9H2L4 133 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 FAM86C1Q9NVL1 165 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 BARHL2Q9NY43 387 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 PODXL2Q9NZ53 605 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 SF3B6Q9Y3B4 125 aaKnown RBP6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 HCFC2Q9Y5Z7 792 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 MRFAP1Q9Y605 127 aa6.61□□□□□ -1.35
TNFRSF1A-206ENST00000535038 SIPA1L1O43166 1804 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 IGKV6D-41A0A0C4DH26 115 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ESYT2A0FGR8 921 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ATP8B1O43520 1251 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 RHOBTB3O94955 611 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 TBC1D8O95759 1140 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 RPN1P04843 607 aaKnown RBP6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 CD3EP07766 207 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ITGA4P13612 1032 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 TACR1P25103 407 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ARHGAP25P42331 645 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 FXR1P51114 621 aaKnown RBP eCLIP6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 RHBDL3P58872 404 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 KRTAP10-2P60368 255 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 GSTO1P78417 241 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 TFAP4Q01664 338 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 MTF1Q14872 753 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 FBXW10Q5XX13 1052 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 PRR5LQ6MZQ0 368 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 CNNM4Q6P4Q7 775 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ZNF662Q6ZS27 426 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 IGSF22Q8N9C0 903 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 GIMAP8Q8ND71 665 aaPredicted RBP6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 DYNLL2Q96FJ2 89 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 PTCHD1Q96NR3 888 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 FCRL3Q96P31 734 aaPredicted RBP6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 TMEM47Q9BQJ4 181 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 TTYH3Q9C0H2 523 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ZMYND12Q9H0C1 365 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 KAT14Q9H8E8 782 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 MAGEF1Q9HAY2 307 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 MCM9Q9NXL9 1143 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 SUSD2Q9UGT4 822 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 DBR1Q9UK59 544 aaKnown RBP6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 FAN1Q9Y2M0 1017 aa6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 V9GYY5 206 aaPredicted RBP6.6□□□□□ -1.35
TNFRSF1A-206ENST00000535038 A0A0U1RQJ8 604 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 RASSF10A6NK89 507 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 TSPY2A6NKD2 308 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 F8W031 263 aaPredicted RBP6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 H7C1D1 291 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 LDHCP07864 332 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ADRB1P08588 477 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 TPM1P09493 284 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 CCDC175P0C221 793 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 SNHG28P0DPA3 235 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 IFNGR1P15260 489 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 CDK11BP21127 795 aaKnown RBP6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 GUCY2CP25092 1073 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ZNF76P36508 570 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 PRCPP42785 496 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 SLURP1P55000 103 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 STX17P56962 302 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 GPSM2P81274 684 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 NFKB2Q00653 900 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 AMPD2Q01433 879 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 POU4F1Q01851 419 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 GABPAQ06546 454 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 PAK1Q13153 545 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 TUBB2AQ13885 445 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 TRIM14Q14142 442 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 ZYXQ15942 572 aaKnown RBP6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 HSP90AA4PQ58FG1 418 aa6.59□□□□□ -1.35
TNFRSF1A-206ENST00000535038 TCP11X2Q5H9J9 407 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms