RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 KIFAP3Q92845 792 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 COLEC11Q9BWP8 271 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 SLC2A4RGQ9NR83 387 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 DDX19AQ9NUU7 478 aaKnown RBP11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 ZSCAN32Q9NX65 697 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 SNTG2Q9NY99 539 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 KLK14Q9P0G3 267 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 FNIP2Q9P278 1114 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 PARP2Q9UGN5 583 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 GMEB2Q9UKD1 530 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 ADAM28Q9UKQ2 775 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 USP20Q9Y2K6 914 aa11.09□□□□□ -0.63
CLSTN3-203ENST00000534830 KANSL1LA0AUZ9 987 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 PP2D1A8MPX8 630 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 E9PMD0 336 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 C2CD2LO14523 706 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 NR1I2O75469 434 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 RECQL4O94761 1208 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 URODP06132 367 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 TGM1P22735 817 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 GJB2P29033 226 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 CDC25AP30304 524 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 GLUD2P49448 558 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 EFNA5P52803 228 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 MAPK7Q13164 816 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 TUSC3Q13454 348 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 SNW1Q13573 536 aaKnown RBP11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 ACAP1Q15027 740 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 RILPL1Q5EBL4 403 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 RINT1Q6NUQ1 792 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 LILRA6Q6PI73 481 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 DTHD1Q6ZMT9 781 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 GET4Q7L5D6 327 aaPredicted RBP11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 TAS1R3Q7RTX0 852 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 DEPTORQ8TB45 409 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 SNX29Q8TEQ0 813 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 HDAC7Q8WUI4 952 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 IFT74Q96LB3 600 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 PAAF1Q9BRP4 392 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 KIFC3Q9BVG8 833 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 RAB34Q9BZG1 259 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 EPC1Q9H2F5 836 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 TMEM134Q9H6X4 195 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 PIDD1Q9HB75 910 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 PTPRHQ9HD43 1115 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 PARD6AQ9NPB6 346 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 ARHGAP28Q9P2N2 729 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 DNM3Q9UQ16 869 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 NUMBLQ9Y6R0 609 aa11.08□□□□□ -0.64
CLSTN3-203ENST00000534830 PATJQ8NI35 1801 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 FAM170BA6NMN3 283 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 TBC1D4O60343 1298 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 RFPL2O75678 378 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 THP07101 528 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 ADH1AP07327 375 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 LAMP2P13473 410 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 NPTX2P47972 431 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 MCM2P49736 904 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 GPC5P78333 572 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 SPEM2Q0P670 501 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 HTR4Q13639 388 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 HSP90AA2PQ14568 343 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 USP41Q3LFD5 358 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 DCAF4L1Q3SXM0 396 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 XKR4Q5GH76 650 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 KRT79Q5XKE5 535 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 ELMSAN1Q6PJG2 1045 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 TSSK4Q6SA08 328 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 ALKAL1Q6UXT8 129 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 CYP26C1Q6V0L0 522 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 KCTD17Q8N5Z5 321 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 ZBTB44Q8NCP5 570 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 TBC1D32Q96NH3 1257 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 PNMA5Q96PV4 448 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 ACO2Q99798 780 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 ADPGKQ9BRR6 497 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 NTPCRQ9BSD7 190 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 RUSC1Q9BVN2 902 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.07□□□□□ -0.644e-6■■□□□ 12.1
CLSTN3-203ENST00000534830 CACNG4Q9UBN1 327 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 RAB23Q9ULC3 237 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 TNFSF13BQ9Y275 285 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 MTF2Q9Y483 593 aaPredicted RBP11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 KIF3AQ9Y496 699 aa11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.07□□□□□ -0.64
CLSTN3-203ENST00000534830 NOTCH4Q99466 2003 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 MYH15Q9Y2K3 1946 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 ANHXE9PGG2 379 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 K7ERI5 159 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 ABLIM1O14639 778 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 SLC30A4O14863 429 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 LILRB5O75023 590 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 HIP1RO75146 1068 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 TADA2AO75478 443 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 PROZP22891 400 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 GUCY2CP25092 1073 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 LPAL2Q16609 132 aa11.06□□□□□ -0.64
CLSTN3-203ENST00000534830 ATF7IP2Q5U623 682 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms