RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 DDX50Q9BQ39 737 aaKnown RBP9.65□□□□□ -0.86
SF3B2-216ENST00000534765 TEX13BQ9BXU2 312 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 NT5C3AQ9H0P0 336 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 RRAGCQ9HB90 399 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 ETNK1Q9HBU6 452 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 TRIM33Q9UPN9 1127 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 SZT2Q5T011 3432 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 KDM3AQ9Y4C1 1321 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 TARSL2A2RTX5 802 aaKnown RBP9.65□□□□□ -0.86
SF3B2-216ENST00000534765 C19orf81C9J6K1 198 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 BCRP11274 1271 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 NQO1P15559 274 aaKnown RBP9.65□□□□□ -0.86
SF3B2-216ENST00000534765 PPP2R2AP63151 447 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 SUPT20HL1Q3ZLR7 823 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 SLC44A4Q53GD3 710 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 LDLRAD1Q5T700 205 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 GRAMD4Q6IC98 578 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 CYFIP1Q7L576 1253 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 TAS1R3Q7RTX0 852 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 CHMP6Q96FZ7 201 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 RAB34Q9BZG1 259 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 TRIM7Q9C029 511 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 SPATC1LQ9H0A9 340 aa9.65□□□□□ -0.86
SF3B2-216ENST00000534765 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.65□□□□□ -0.863e-8■■■■■ 72.7
SF3B2-216ENST00000534765 INTS9Q9NV88 658 aaKnown RBP9.65□□□□□ -0.86
SF3B2-216ENST00000534765 FECHP22830 423 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 SEPT7Q16181 437 aaKnown RBP9.64□□□□□ -0.87
SF3B2-216ENST00000534765 RFX8Q6ZV50 586 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 MSL3Q8N5Y2 521 aaKnown RBP9.64□□□□□ -0.87
SF3B2-216ENST00000534765 BAP1Q92560 729 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 ZIC5Q96T25 663 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 PYM1Q9BRP8 204 aaKnown RBP9.64□□□□□ -0.87
SF3B2-216ENST00000534765 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.64□□□□□ -0.87
SF3B2-216ENST00000534765 TEKT3Q9BXF9 490 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 HAPLN2Q9GZV7 340 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 XPNPEP1Q9NQW7 623 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 SALL4Q9UJQ4 1053 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 PPP2R3BQ9Y5P8 575 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 SERPINB3P29508 390 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 ZNF131P52739 623 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 EPHA7Q15375 998 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 C1orf220Q5T0J3 134 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 SLC39A4Q6P5W5 647 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 TRAPPC11Q7Z392 1133 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 RBM12BQ8IXT5 1001 aaKnown RBP9.64□□□□□ -0.87
SF3B2-216ENST00000534765 DTX3LQ8TDB6 740 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 NOC4LQ9BVI4 516 aaKnown RBP9.64□□□□□ -0.87
SF3B2-216ENST00000534765 BRD8Q9H0E9 1235 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 AS3MTQ9HBK9 375 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 ZNF233A6NK53 670 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 GCNT3O95395 438 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 SLC9A1P19634 815 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 ADSSP30520 456 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 GSTT1P30711 240 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 YWHABP31946 246 aaKnown RBP9.64□□□□□ -0.87
SF3B2-216ENST00000534765 TUBP50607 506 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 RNASELQ05823 741 aaKnown RBP9.64□□□□□ -0.87
SF3B2-216ENST00000534765 DHX9Q08211 1270 aaKnown RBP9.64□□□□□ -0.87
SF3B2-216ENST00000534765 CBX3Q13185 183 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 TTLL12Q14166 644 aaPredicted RBP9.64□□□□□ -0.87
SF3B2-216ENST00000534765 IFI16Q16666 785 aaKnown RBP9.64□□□□□ -0.87
SF3B2-216ENST00000534765 VWA3BQ502W6 1294 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 SH2D4BQ5SQS7 431 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 ZNF720Q7Z2F6 126 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 MIER3Q7Z3K6 550 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 CCDC25Q86WR0 208 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 DDX42Q86XP3 938 aaKnown RBP eCLIP9.64□□□□□ -0.87
SF3B2-216ENST00000534765 DNAJC9Q8WXX5 260 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 KIFAP3Q92845 792 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 LACRTQ9GZZ8 138 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 NDST4Q9H3R1 872 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 METTL5Q9NRN9 209 aaKnown RBP9.64□□□□□ -0.87
SF3B2-216ENST00000534765 KCNH4Q9UQ05 1017 aa9.64□□□□□ -0.87
SF3B2-216ENST00000534765 MGRN1O60291 552 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 GJB1P08034 283 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 HAUS3Q68CZ6 603 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 SWSAP1Q6NVH7 229 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 PADI6Q6TGC4 694 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 TRPM8Q7Z2W7 1104 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 SAPCD2Q86UD0 394 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 TRIM59Q8IWR1 403 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 C17orf50Q8WW18 174 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ZMAT2Q96NC0 199 aaKnown RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 NR1H4Q96RI1 486 aaPredicted RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 SIKE1Q9BRV8 207 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 TUFT1Q9NNX1 390 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ABCF3Q9NUQ8 709 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 PCMTD2Q9NV79 361 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ARHGAP20Q9P2F6 1191 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 SYNGAP1Q96PV0 1343 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 ANKRD63C9JTQ0 380 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 HOXA7P31268 230 aaPredicted RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 MTIF2P46199 727 aaKnown RBP9.63□□□□□ -0.87
SF3B2-216ENST00000534765 AMPD3Q01432 767 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 XRCC4Q13426 336 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 HSDL1Q3SXM5 330 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 CBWD6Q4V339 395 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 CBWD3Q5JTY5 395 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 CBWD5Q5RIA9 395 aa9.63□□□□□ -0.87
SF3B2-216ENST00000534765 USP50Q70EL3 339 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms