RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 ZFP14Q9HCL3 533 aa8.66□□□□□ -1.02
NXF1-215ENST00000533440 ZNF334Q9HCZ1 680 aaPredicted RBP8.66□□□□□ -1.02
NXF1-215ENST00000533440 KCNMB3Q9NPA1 279 aa8.66□□□□□ -1.02
NXF1-215ENST00000533440 PARP2Q9UGN5 583 aa8.66□□□□□ -1.02
NXF1-215ENST00000533440 NAP1L2Q9ULW6 460 aaPredicted RBP8.66□□□□□ -1.02
NXF1-215ENST00000533440 GREB1Q4ZG55 1949 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 ARHGEF37A1IGU5 675 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 TMEM189-UBE2V1I3L0A0 370 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 ZBTB39O15060 712 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 SLC37A4O43826 429 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 MICAL2O94851 1124 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 THP07101 528 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 HMGB1P09429 215 aaKnown RBP8.65□□□□□ -1.02
NXF1-215ENST00000533440 PTPN2P17706 415 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 PSMC3P17980 439 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 ARL2P36404 184 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 MLLT6P55198 1093 aaPredicted RBP8.65□□□□□ -1.02
NXF1-215ENST00000533440 NLRP5P59047 1200 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 SPIRE1Q08AE8 756 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 PTGDRQ13258 359 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 TFDP1Q14186 410 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 ACAP1Q15027 740 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 XKR9Q5GH70 373 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 FAM78AQ5JUQ0 283 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 FAM160A2Q8N612 972 aaPredicted RBP8.65□□□□□ -1.02
NXF1-215ENST00000533440 ASAP3Q8TDY4 903 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 FAM20AQ96MK3 541 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 ASB16Q96NS5 453 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 SLC26A6Q9BXS9 759 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 DDX25Q9UHL0 483 aaKnown RBP8.65□□□□□ -1.02
NXF1-215ENST00000533440 PCDHA4Q9UN74 947 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 BACE2Q9Y5Z0 518 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 CDY1Q9Y6F8 540 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 PIAS3Q9Y6X2 628 aa8.65□□□□□ -1.02
NXF1-215ENST00000533440 ANKRD11Q6UB99 2663 aaPredicted RBP8.65□□□□□ -1.03
NXF1-215ENST00000533440 LAMA1P25391 3075 aa8.65□□□□□ -1.03
NXF1-215ENST00000533440 ARID2Q68CP9 1835 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 WDR27A2RRH5 827 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 ARNTLO00327 626 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 ABLIM3O94929 683 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 KCNK5O95279 499 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 ZNF806P0C7X5 589 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 GLRA2P23416 452 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 IGFBP6P24592 240 aaPredicted RBP8.64□□□□□ -1.03
NXF1-215ENST00000533440 GDI1P31150 447 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 HOXA6P31267 233 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 CCR2P41597 374 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 KRT32Q14532 448 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 SF3A2Q15428 464 aaKnown RBP8.64□□□□□ -1.03
NXF1-215ENST00000533440 NPY5RQ15761 445 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 AASDHQ4L235 1098 aaPredicted RBP8.64□□□□□ -1.03
NXF1-215ENST00000533440 SLC8B1Q6J4K2 584 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 CD300LGQ6UXG3 332 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 VITQ6UXI7 678 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 Q6ZUG5 572 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 BLIDQ8IZY5 108 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 FBXL16Q8N461 479 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 KDF1Q8NAX2 398 aaPredicted RBP8.64□□□□□ -1.03
NXF1-215ENST00000533440 DAGLBQ8NCG7 672 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 ZNF461Q8TAF7 563 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 DEPDC1BQ8WUY9 529 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 SMARCD2Q92925 531 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 BRF1Q92994 677 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 TCEAL4Q96EI5 215 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 MSANTD3Q96H12 275 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 DYDC2Q96IM9 177 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 LOXL4Q96JB6 756 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 PRIMPOLQ96LW4 560 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 AGXT2Q9BYV1 514 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 CXCL16Q9H2A7 254 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 ZSWIM4Q9H7M6 989 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 TRPV4Q9HBA0 871 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 RXFP3Q9NSD7 469 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 RGL1Q9NZL6 768 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 ZMIZ1Q9ULJ6 1067 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 TICRRQ7Z2Z1 1910 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 LAMA5O15230 3695 aa8.64□□□□□ -1.03
NXF1-215ENST00000533440 NCANO14594 1321 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 ZNF197O14709 1029 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 MOSPD3O75425 235 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 DGAT1O75907 488 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 SLITRK3O94933 977 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 LRG1P02750 347 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 CPA1P15085 419 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 CCNE1P24864 410 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 RBM25P49756 843 aaKnown RBP8.63□□□□□ -1.03
NXF1-215ENST00000533440 FGD1P98174 961 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 ROR1Q01973 937 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 LRRC32Q14392 662 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 INF2Q27J81 1249 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 WDR44Q5JSH3 913 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 PLA2G2CQ5R387 149 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 STPG1Q5TH74 334 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 PPP4R3AQ6IN85 833 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 C1orf228Q6PIY5 440 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 UNQ6494/PRO21346Q6UXR6 183 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 ANKS3Q6ZW76 656 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 WDR5BQ86VZ2 330 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 MFSD6LQ8IWD5 586 aa8.63□□□□□ -1.03
NXF1-215ENST00000533440 HAS1Q92839 578 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms