RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 ELP3Q9H9T3 547 aa12.97□□□□□ -0.33
BDNF-218ENST00000533246 FAM86B1E9PN63 330 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 CSDE1O75534 798 aaKnown RBP12.96□□□□□ -0.33
BDNF-218ENST00000533246 FAM86B2P0C5J1 330 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 PRKCEQ02156 737 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 IL17AQ16552 155 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 PREPLQ4J6C6 727 aaPredicted RBP12.96□□□□□ -0.33
BDNF-218ENST00000533246 RHOT1Q8IXI2 618 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 PDCD7Q8N8D1 485 aaKnown RBP12.96□□□□□ -0.33
BDNF-218ENST00000533246 USP38Q8NB14 1042 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 SLC13A1Q9BZW2 595 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 ACTR5Q9H9F9 607 aaPredicted RBP12.96□□□□□ -0.33
BDNF-218ENST00000533246 KIAA1586Q9HCI6 787 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 PITPNM2Q9BZ72 1349 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 COL5A2P05997 1499 aaPredicted RBP12.96□□□□□ -0.33
BDNF-218ENST00000533246 RNF225M0QZC1 329 aaPredicted RBP12.96□□□□□ -0.33
BDNF-218ENST00000533246 RTN2O75298 545 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 SASH3O75995 380 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 GSTA1P08263 222 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 GSTA2P09210 222 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 TXNP10599 105 aaKnown RBP12.96□□□□□ -0.33
BDNF-218ENST00000533246 SMARCA1P28370 1054 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 RFC1P35251 1148 aaPredicted RBP12.96□□□□□ -0.33
BDNF-218ENST00000533246 GPC3P51654 580 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 RPS6KA2Q15349 733 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 SMTNL2Q2TAL5 461 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 ZNF571Q7Z3V5 609 aaPredicted RBP12.96□□□□□ -0.33
BDNF-218ENST00000533246 KCNV2Q8TDN2 545 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 ATG4AQ8WYN0 398 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 FAM81BQ96LP2 452 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 KLF6Q99612 283 aaPredicted RBP12.96□□□□□ -0.33
BDNF-218ENST00000533246 PHACTR1Q9C0D0 580 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 AP5M1Q9H0R1 490 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 GGA3Q9NZ52 723 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 RNF181Q9P0P0 153 aa12.96□□□□□ -0.33
BDNF-218ENST00000533246 GRID2IPA4D2P6 1211 aa12.96□□□□□ -0.34
BDNF-218ENST00000533246 EPHB6O15197 1021 aa12.96□□□□□ -0.34
BDNF-218ENST00000533246 DGAT1O75907 488 aa12.96□□□□□ -0.34
BDNF-218ENST00000533246 KITP10721 976 aa12.96□□□□□ -0.34
BDNF-218ENST00000533246 GMPSP49915 693 aaPredicted RBP12.96□□□□□ -0.34
BDNF-218ENST00000533246 ARSEP51690 589 aa12.96□□□□□ -0.34
BDNF-218ENST00000533246 DMPKQ09013 629 aa12.96□□□□□ -0.34
BDNF-218ENST00000533246 SHROOM1Q2M3G4 852 aaPredicted RBP12.96□□□□□ -0.34
BDNF-218ENST00000533246 SIX6OS1Q8N1H7 587 aa12.96□□□□□ -0.34
BDNF-218ENST00000533246 USP6NLQ92738 828 aa12.96□□□□□ -0.34
BDNF-218ENST00000533246 CCT8L2Q96SF2 557 aa12.96□□□□□ -0.34
BDNF-218ENST00000533246 SLC40A1Q9NP59 571 aa12.96□□□□□ -0.34
BDNF-218ENST00000533246 SHPRHQ149N8 1683 aa12.96□□□□□ -0.34
BDNF-218ENST00000533246 CDH6P55285 790 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 TPD52P55327 224 aaPredicted RBP12.95□□□□□ -0.34
BDNF-218ENST00000533246 DDR1Q08345 913 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 ORC1Q13415 861 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 NCOA4Q13772 614 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 TWF2Q6IBS0 349 aaKnown RBP12.95□□□□□ -0.34
BDNF-218ENST00000533246 EPM2AIP1Q7L775 607 aaPredicted RBP12.95□□□□□ -0.34
BDNF-218ENST00000533246 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
BDNF-218ENST00000533246 ZNF280CQ8ND82 737 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 TOPORSQ9NS56 1045 aaPredicted RBP12.95□□□□□ -0.34
BDNF-218ENST00000533246 HAUS2Q9NVX0 235 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 SLIT1O75093 1534 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 ZBTB17Q13105 803 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 SLC44A4Q53GD3 710 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 XKR3Q5GH77 459 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 DHX38Q92620 1227 aaKnown RBP12.95□□□□□ -0.34
BDNF-218ENST00000533246 ZDHHC15Q96MV8 337 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 ANKZF1Q9H8Y5 726 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 UTP6Q9NYH9 597 aaKnown RBP12.95□□□□□ -0.34
BDNF-218ENST00000533246 EML1O00423 815 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 WDR46O15213 610 aaKnown RBP12.95□□□□□ -0.34
BDNF-218ENST00000533246 SUPT3HO75486 399 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 HLA-DRAP01903 254 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 GLI1P08151 1106 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 ITGA4P13612 1032 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 ADORA2BP29275 332 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 SLC29A2Q14542 456 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 R3HDM1Q15032 1099 aaKnown RBP12.95□□□□□ -0.34
BDNF-218ENST00000533246 NT5DC1Q5TFE4 455 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 JAMLQ86YT9 394 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 RBM41Q96IZ5 413 aaKnown RBP12.95□□□□□ -0.34
BDNF-218ENST00000533246 FGD4Q96M96 766 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 MRPL4Q9BYD3 311 aaKnown RBP12.95□□□□□ -0.34
BDNF-218ENST00000533246 WNT8AQ9H1J5 351 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 DNAJC5Q9H3Z4 198 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 SCOCQ9UIL1 159 aa12.95□□□□□ -0.34
BDNF-218ENST00000533246 A0A1W2PQJ5 194 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 CCDC78A2IDD5 438 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 TISP43B9A030 160 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 LSM1O15116 133 aaKnown RBP12.94□□□□□ -0.34
BDNF-218ENST00000533246 SGPL1O95470 568 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 SERPINB6P35237 376 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 TBX2Q13207 712 aaPredicted RBP12.94□□□□□ -0.34
BDNF-218ENST00000533246 RWDD4Q6NW29 188 aaKnown RBP12.94□□□□□ -0.34
BDNF-218ENST00000533246 C4orf33Q8N1A6 199 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 FAM193BQ96PV7 902 aaPredicted RBP12.94□□□□□ -0.34
BDNF-218ENST00000533246 FBXO40Q9UH90 709 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 KIF22Q14807 665 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 APOBEC3HQ6NTF7 200 aaKnown RBP12.94□□□□□ -0.34
BDNF-218ENST00000533246 RFX8Q6ZV50 586 aa12.94□□□□□ -0.34
BDNF-218ENST00000533246 PDZD4Q76G19 769 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms