RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 FAM26FQ5R3K3 315 aa22.3■■□□□ 1.16
CCS-208ENST00000533244 FUT10Q6P4F1 479 aa22.3■■□□□ 1.16
CCS-208ENST00000533244 TAS1R1Q7RTX1 841 aa22.3■■□□□ 1.16
CCS-208ENST00000533244 VN1R2Q8NFZ6 395 aa22.3■■□□□ 1.16
CCS-208ENST00000533244 AUTS2Q8WXX7 1259 aa22.3■■□□□ 1.16
CCS-208ENST00000533244 GPR62Q9BZJ7 368 aa22.3■■□□□ 1.16
CCS-208ENST00000533244 TMEM206Q9H813 350 aa22.3■■□□□ 1.16
CCS-208ENST00000533244 CHST7Q9NS84 486 aa22.3■■□□□ 1.16
CCS-208ENST00000533244 EIF3DO15371 548 aaKnown RBP eCLIP22.29■■□□□ 1.16
CCS-208ENST00000533244 KLRC4O43908 158 aa22.29■■□□□ 1.16
CCS-208ENST00000533244 PRPF6O94906 941 aaKnown RBP22.29■■□□□ 1.16
CCS-208ENST00000533244 MYL1P05976 194 aa22.29■■□□□ 1.16
CCS-208ENST00000533244 KCNQ1P51787 676 aa22.29■■□□□ 1.16
CCS-208ENST00000533244 UPP1Q16831 310 aa22.29■■□□□ 1.16
CCS-208ENST00000533244 TMEM184AQ6ZMB5 413 aa22.29■■□□□ 1.16
CCS-208ENST00000533244 GOLGA2P5Q9HBQ8 144 aa22.29■■□□□ 1.16
CCS-208ENST00000533244 CLEC1BQ9P126 229 aa22.29■■□□□ 1.16
CCS-208ENST00000533244 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.28■■□□□ 1.16
CCS-208ENST00000533244 BMP1P13497 986 aa22.28■■□□□ 1.16
CCS-208ENST00000533244 HOXD13P35453 343 aa22.28■■□□□ 1.16
CCS-208ENST00000533244 CLCNKBP51801 687 aa22.28■■□□□ 1.16
CCS-208ENST00000533244 POU5F1Q01860 360 aaKnown RBP22.28■■□□□ 1.16
CCS-208ENST00000533244 POSTNQ15063 836 aa22.28■■□□□ 1.16
CCS-208ENST00000533244 ZBTB6Q15916 424 aa22.28■■□□□ 1.16
CCS-208ENST00000533244 KIAA0319Q5VV43 1072 aa22.28■■□□□ 1.16
CCS-208ENST00000533244 CD300LGQ6UXG3 332 aa22.28■■□□□ 1.16
CCS-208ENST00000533244 STXBP4Q6ZWJ1 553 aa22.28■■□□□ 1.16
CCS-208ENST00000533244 GPR65Q8IYL9 337 aa22.28■■□□□ 1.16
CCS-208ENST00000533244 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.28■■□□□ 1.16
CCS-208ENST00000533244 ZNF507Q8TCN5 953 aa22.28■■□□□ 1.16
CCS-208ENST00000533244 MSLNLQ96KJ4 702 aa22.28■■□□□ 1.16
CCS-208ENST00000533244 AGO2Q9UKV8 859 aaKnown RBP22.28■■□□□ 1.16
CCS-208ENST00000533244 SF3B1O75533 1304 aaKnown RBP eCLIP22.27■■□□□ 1.16
CCS-208ENST00000533244 H3BQ06 376 aaPredicted RBP22.27■■□□□ 1.16
CCS-208ENST00000533244 CLASP2O75122 1294 aaKnown RBP22.27■■□□□ 1.16
CCS-208ENST00000533244 TADA2AO75478 443 aa22.27■■□□□ 1.16
CCS-208ENST00000533244 GARTP22102 1010 aa22.27■■□□□ 1.16
CCS-208ENST00000533244 GLUD2P49448 558 aa22.27■■□□□ 1.16
CCS-208ENST00000533244 DSG1Q02413 1049 aa22.27■■□□□ 1.16
CCS-208ENST00000533244 DCLRE1AQ6PJP8 1040 aa22.27■■□□□ 1.16
CCS-208ENST00000533244 CRELD2Q6UXH1 353 aaPredicted RBP22.27■■□□□ 1.16
CCS-208ENST00000533244 POMGNT1Q8WZA1 660 aa22.27■■□□□ 1.16
CCS-208ENST00000533244 C18orf25Q96B23 403 aaPredicted RBP22.27■■□□□ 1.16
CCS-208ENST00000533244 TSPAN18Q96SJ8 248 aa22.27■■□□□ 1.16
CCS-208ENST00000533244 RPF1Q9H9Y2 349 aaKnown RBP22.27■■□□□ 1.16
CCS-208ENST00000533244 MRPL17Q9NRX2 175 aaKnown RBP22.27■■□□□ 1.16
CCS-208ENST00000533244 UBE4BO95155 1302 aa22.26■■□□□ 1.15
CCS-208ENST00000533244 ANK1P16157 1881 aa22.26■■□□□ 1.15
CCS-208ENST00000533244 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.26■■□□□ 1.15
CCS-208ENST00000533244 LACTBL1A8MY62 500 aa22.26■■□□□ 1.15
CCS-208ENST00000533244 URODP06132 367 aa22.26■■□□□ 1.15
CCS-208ENST00000533244 IGFBP6P24592 240 aaPredicted RBP22.26■■□□□ 1.15
CCS-208ENST00000533244 RBM10P98175 930 aaKnown RBP22.26■■□□□ 1.15
CCS-208ENST00000533244 PPP2R3AQ06190 1150 aa22.26■■□□□ 1.15
CCS-208ENST00000533244 KRBA2Q6ZNG9 492 aa22.26■■□□□ 1.15
CCS-208ENST00000533244 CD302Q8IX05 232 aa22.26■■□□□ 1.15
CCS-208ENST00000533244 C3orf58Q8NDZ4 430 aa22.26■■□□□ 1.15
CCS-208ENST00000533244 HASPINQ8TF76 798 aa22.26■■□□□ 1.15
CCS-208ENST00000533244 DDX27Q96GQ7 796 aaKnown RBP22.26■■□□□ 1.15
CCS-208ENST00000533244 RXFP1Q9HBX9 757 aa22.26■■□□□ 1.15
CCS-208ENST00000533244 SSX2IPQ9Y2D8 614 aa22.26■■□□□ 1.15
CCS-208ENST00000533244 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.26■■□□□ 1.15
CCS-208ENST00000533244 TTC28Q96AY4 2481 aa22.26■■□□□ 1.15
CCS-208ENST00000533244 ZNF202O95125 648 aa22.25■■□□□ 1.15
CCS-208ENST00000533244 RPL9P32969 192 aaKnown RBP22.25■■□□□ 1.15
CCS-208ENST00000533244 ACOT2P49753 483 aa22.25■■□□□ 1.15
CCS-208ENST00000533244 NDUFV1P49821 464 aa22.25■■□□□ 1.15
CCS-208ENST00000533244 BMT2Q1RMZ1 405 aa22.25■■□□□ 1.15
CCS-208ENST00000533244 USP41Q3LFD5 358 aa22.25■■□□□ 1.15
CCS-208ENST00000533244 EP400NLQ6ZTU2 488 aa22.25■■□□□ 1.15
CCS-208ENST00000533244 SYCP3Q8IZU3 236 aa22.25■■□□□ 1.15
CCS-208ENST00000533244 FMR1NBQ8N0W7 255 aaPredicted RBP22.25■■□□□ 1.15
CCS-208ENST00000533244 SCFD1Q8WVM8 642 aa22.25■■□□□ 1.15
CCS-208ENST00000533244 KLHL5Q96PQ7 755 aa22.25■■□□□ 1.15
CCS-208ENST00000533244 CHMP5Q9NZZ3 219 aa22.25■■□□□ 1.15
CCS-208ENST00000533244 BARX2Q9UMQ3 279 aaPredicted RBP22.25■■□□□ 1.15
CCS-208ENST00000533244 HCFC2Q9Y5Z7 792 aa22.25■■□□□ 1.15
CCS-208ENST00000533244 PODXLO00592 558 aa22.24■■□□□ 1.15
CCS-208ENST00000533244 B3GAT3O94766 335 aa22.24■■□□□ 1.15
CCS-208ENST00000533244 CNPP09543 421 aaKnown RBP22.24■■□□□ 1.15
CCS-208ENST00000533244 CYP3A5P20815 502 aa22.24■■□□□ 1.15
CCS-208ENST00000533244 ELAVL2Q12926 359 aaKnown RBP22.24■■□□□ 1.15
CCS-208ENST00000533244 SLC22A17Q8WUG5 538 aa22.24■■□□□ 1.15
CCS-208ENST00000533244 CBWD1Q9BRT8 395 aa22.24■■□□□ 1.15
CCS-208ENST00000533244 EMILIN2Q9BXX0 1053 aa22.24■■□□□ 1.15
CCS-208ENST00000533244 TUBGCP4Q9UGJ1 667 aa22.24■■□□□ 1.15
CCS-208ENST00000533244 UBQLN1Q9UMX0 589 aaKnown RBP22.24■■□□□ 1.15
CCS-208ENST00000533244 VWA8A3KMH1 1905 aa22.24■■□□□ 1.15
CCS-208ENST00000533244 PRR29P0C7W0 189 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 LRPAP1P30533 357 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 CA8P35219 290 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 SPAG1Q07617 926 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 PUS10Q3MIT2 529 aaKnown RBP22.23■■□□□ 1.15
CCS-208ENST00000533244 KMT5BQ4FZB7 885 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 TPRNQ4KMQ1 711 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 RTP2Q5QGT7 225 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 ENGASEQ8NFI3 743 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 KIF12Q96FN5 646 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 B3GALT6Q96L58 329 aa22.23■■□□□ 1.15
CCS-208ENST00000533244 ASB7Q9H672 318 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms