RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CBWD5Q5RIA9 395 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 USP38Q8NB14 1042 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 PARD3BQ8TEW8 1205 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 TRIM6Q9C030 488 aaPredicted RBP20■□□□□ 0.79
SMPD1-208ENST00000533123 PDE11AQ9HCR9 933 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 PRDM4Q9UKN5 801 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 HES2Q9Y543 173 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 SQORQ9Y6N5 450 aa20■□□□□ 0.79
SMPD1-208ENST00000533123 CCL23P55773 120 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 ETF1P62495 437 aaKnown RBP19.99■□□□□ 0.79
SMPD1-208ENST00000533123 DCAF4L1Q3SXM0 396 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 C1orf220Q5T0J3 134 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 UBXN11Q5T124 520 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 FAM212AQ96EL1 285 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 ARID3AQ99856 593 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 IRX2Q9BZI1 471 aaPredicted RBP19.99■□□□□ 0.79
SMPD1-208ENST00000533123 EDEM3Q9BZQ6 932 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 TMEM39AQ9NV64 488 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 ARHGAP20Q9P2F6 1191 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 GOLGA6L9A6NEM1 432 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 KIF2AO00139 706 aaPredicted RBP19.99■□□□□ 0.79
SMPD1-208ENST00000533123 RIOK3O14730 519 aaKnown RBP19.99■□□□□ 0.79
SMPD1-208ENST00000533123 FMO5P49326 533 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 GPNMBQ14956 572 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 GBP6Q6ZN66 633 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 UBE2Q1Q7Z7E8 422 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 SCLYQ96I15 445 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 IFIH1Q9BYX4 1025 aaKnown RBP19.99■□□□□ 0.79
SMPD1-208ENST00000533123 DNAI1Q9UI46 699 aa19.99■□□□□ 0.79
SMPD1-208ENST00000533123 LRRIQ3A6PVS8 624 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-208ENST00000533123 NBNO60934 754 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 CLTBP09497 229 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 CXCL8P10145 99 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 CYP2C18P33260 490 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 CDK17Q00537 523 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 ENOX2Q16206 610 aaKnown RBP19.98■□□□□ 0.79
SMPD1-208ENST00000533123 BRSK2Q8IWQ3 736 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 FAM84AQ96KN4 292 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 WNT8AQ9H1J5 351 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 NXF3Q9H4D5 531 aaKnown RBP19.98■□□□□ 0.79
SMPD1-208ENST00000533123 SIX2Q9NPC8 291 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 CHST12Q9NRB3 414 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 AJAP1Q9UKB5 411 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-208ENST00000533123 TBX21Q9UL17 535 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 FHOD1Q9Y613 1164 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 MGEA5O60502 916 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 CLTAP09496 248 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 ZSCAN20P17040 1043 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-208ENST00000533123 PPP3CAQ08209 521 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 PSMD6Q15008 389 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 KLHDC7AQ5VTJ3 777 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 LMBRD2Q68DH5 695 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-208ENST00000533123 APBB1IPQ7Z5R6 666 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-208ENST00000533123 KIF18AQ8NI77 898 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 CCDC94Q9BW85 323 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-208ENST00000533123 RPF1Q9H9Y2 349 aaKnown RBP19.98■□□□□ 0.79
SMPD1-208ENST00000533123 PLCB1Q9NQ66 1216 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 TOPORSQ9NS56 1045 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-208ENST00000533123 SNTG2Q9NY99 539 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 TFR2Q9UP52 801 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 PAXBP1Q9Y5B6 917 aa19.98■□□□□ 0.79
SMPD1-208ENST00000533123 UCHL3P15374 230 aa19.97■□□□□ 0.79
SMPD1-208ENST00000533123 GCLMP48507 274 aa19.97■□□□□ 0.79
SMPD1-208ENST00000533123 GJB7Q6PEY0 223 aa19.97■□□□□ 0.79
SMPD1-208ENST00000533123 TMC2Q8TDI7 906 aa19.97■□□□□ 0.79
SMPD1-208ENST00000533123 TSC1Q92574 1164 aa19.97■□□□□ 0.79
SMPD1-208ENST00000533123 FNBP1Q96RU3 617 aa19.97■□□□□ 0.79
SMPD1-208ENST00000533123 WDR24Q96S15 920 aa19.97■□□□□ 0.79
SMPD1-208ENST00000533123 APOL6Q9BWW8 343 aa19.97■□□□□ 0.79
SMPD1-208ENST00000533123 TET1Q8NFU7 2136 aa19.97■□□□□ 0.79
SMPD1-208ENST00000533123 GTPBP10A4D1E9 387 aaKnown RBP19.96■□□□□ 0.79
SMPD1-208ENST00000533123 MEFVO15553 781 aaPredicted RBP19.96■□□□□ 0.79
SMPD1-208ENST00000533123 GRM5P41594 1212 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 GNG11P61952 73 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 RAPGEF1Q13905 1077 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 COL13A1Q5TAT6 717 aaPredicted RBP19.96■□□□□ 0.79
SMPD1-208ENST00000533123 ACAP3Q96P50 834 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 TNNI1P19237 187 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 AKAP5P24588 427 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 EIF4A3P38919 411 aaKnown RBP19.96■□□□□ 0.79
SMPD1-208ENST00000533123 ARHGAP25P42331 645 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 MCCD1P59942 119 aaPredicted RBP19.96■□□□□ 0.79
SMPD1-208ENST00000533123 CYP27A1Q02318 531 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 SLC10A6Q3KNW5 377 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 SFMBT2Q5VUG0 894 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 USP37Q86T82 979 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 CCDC42Q96M95 316 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 ADAM2Q99965 735 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 PRDM5Q9NQX1 630 aaPredicted RBP19.96■□□□□ 0.79
SMPD1-208ENST00000533123 PCDH10Q9P2E7 1040 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 TRIM10Q9UDY6 481 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 IPPQ9Y573 584 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 PTPRJQ12913 1337 aa19.96■□□□□ 0.79
SMPD1-208ENST00000533123 CYLC1P35663 651 aaPredicted RBP19.95■□□□□ 0.78
SMPD1-208ENST00000533123 MYL7Q01449 175 aa19.95■□□□□ 0.78
SMPD1-208ENST00000533123 ARID5AQ03989 594 aa19.95■□□□□ 0.78
SMPD1-208ENST00000533123 KYAT1Q16773 422 aa19.95■□□□□ 0.78
SMPD1-208ENST00000533123 HGSNATQ68CP4 663 aa19.95■□□□□ 0.78
SMPD1-208ENST00000533123 CCDC170Q8IYT3 715 aa19.95■□□□□ 0.78
SMPD1-208ENST00000533123 SMG8Q8ND04 991 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms