RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 SURF1Q15526 300 aa15.5■□□□□ 0.07
COL16A1-217ENST00000532877 ALKAL1Q6UXT8 129 aa15.5■□□□□ 0.07
COL16A1-217ENST00000532877 AGMOQ6ZNB7 445 aa15.5■□□□□ 0.07
COL16A1-217ENST00000532877 C16orf59Q7L2K0 433 aa15.5■□□□□ 0.07
COL16A1-217ENST00000532877 PGBD4Q96DM1 585 aa15.5■□□□□ 0.07
COL16A1-217ENST00000532877 FNBP1Q96RU3 617 aa15.5■□□□□ 0.07
COL16A1-217ENST00000532877 CGRRF1Q99675 332 aa15.5■□□□□ 0.07
COL16A1-217ENST00000532877 CXCL16Q9H2A7 254 aa15.5■□□□□ 0.07
COL16A1-217ENST00000532877 ASB7Q9H672 318 aa15.5■□□□□ 0.07
COL16A1-217ENST00000532877 PLEKHA5Q9HAU0 1116 aa15.5■□□□□ 0.07
COL16A1-217ENST00000532877 KLK14Q9P0G3 267 aa15.5■□□□□ 0.07
COL16A1-217ENST00000532877 CNTN3Q9P232 1028 aa15.5■□□□□ 0.07
COL16A1-217ENST00000532877 TNFRSF10AO00220 468 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 AP5Z1O43299 807 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 EFCAB14O75071 495 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 BAIAP3O94812 1187 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 EOMESO95936 686 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 NFICP08651 508 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 ACTN1P12814 892 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 MLH1P40692 756 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 EPHB4P54760 987 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 CLDN10P78369 228 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 PLCB2Q00722 1185 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 VWA3BQ502W6 1294 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 XKR4Q5GH76 650 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 TJAP1Q5JTD0 557 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 LMBRD2Q68DH5 695 aaPredicted RBP15.49■□□□□ 0.07
COL16A1-217ENST00000532877 JADE1Q6IE81 842 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 SARM1Q6SZW1 724 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 WDR49Q8IV35 697 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 CD302Q8IX05 232 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 EFCAB13Q8IY85 973 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 FAM84AQ96KN4 292 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 ZFP42Q96MM3 310 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 POP1Q99575 1024 aaKnown RBP15.49■□□□□ 0.07
COL16A1-217ENST00000532877 VPS16Q9H269 839 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 ELAC1Q9H777 363 aaKnown RBP15.49■□□□□ 0.07
COL16A1-217ENST00000532877 RSAD1Q9HA92 442 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 TMEM161AQ9NX61 479 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 RAPGEFL1Q9UHV5 662 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 GIT1Q9Y2X7 761 aa15.49■□□□□ 0.07
COL16A1-217ENST00000532877 A0A1B0GTH6 734 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 ARL5CA6NH57 179 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 LGALS16A8MUM7 142 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 PES1O00541 588 aaKnown RBP15.48■□□□□ 0.07
COL16A1-217ENST00000532877 AFPP02771 609 aaKnown RBP15.48■□□□□ 0.07
COL16A1-217ENST00000532877 TPM2P07951 284 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 FOSL2P15408 326 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 TNNI1P19237 187 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 GCLMP48507 274 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 WDR5P61964 334 aaKnown RBP15.48■□□□□ 0.07
COL16A1-217ENST00000532877 PPP3CAQ08209 521 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 KCNH2Q12809 1159 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 GLRA4Q5JXX5 417 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 PSRC1Q6PGN9 363 aaPredicted RBP15.48■□□□□ 0.07
COL16A1-217ENST00000532877 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.48■□□□□ 0.07
COL16A1-217ENST00000532877 ZNF365Q70YC5 407 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 CRIPAKQ8N1N5 446 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 KIF12Q96FN5 646 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 ZMAT2Q96NC0 199 aaKnown RBP15.48■□□□□ 0.07
COL16A1-217ENST00000532877 NAP1L5Q96NT1 182 aaPredicted RBP15.48■□□□□ 0.07
COL16A1-217ENST00000532877 GAD1Q99259 594 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 NDST4Q9H3R1 872 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 MMRN2Q9H8L6 949 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 UBN1Q9NPG3 1134 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 RNF19AQ9NV58 838 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 IFNKQ9P0W0 207 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 C2CD2Q9Y426 696 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 PTPRSQ13332 1948 aa15.48■□□□□ 0.07
COL16A1-217ENST00000532877 XIRP2A4UGR9 3374 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 PTGESO14684 152 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 STX10O60499 249 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 FGFR1P11362 822 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 KCNE1P15382 129 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 GTF2H1P32780 548 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 FMO5P49326 533 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 MXI1P50539 228 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 AFF1P51825 1210 aaKnown RBP15.47■□□□□ 0.07
COL16A1-217ENST00000532877 UBASH3AP57075 661 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 TFAMQ00059 246 aaKnown RBP15.47■□□□□ 0.07
COL16A1-217ENST00000532877 TMEM132DQ14C87 1099 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 CBWD6Q4V339 395 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 CBWD3Q5JTY5 395 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 CLLU1OSQ5K130 101 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 CBWD5Q5RIA9 395 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 TMEM240Q5SV17 173 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 OTOP2Q7RTS6 562 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 NPAS4Q8IUM7 802 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 GSTCDQ8NEC7 633 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 OR5B17Q8NGF7 314 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 ZNF516Q92618 1163 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 RPS6KC1Q96S38 1066 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.47■□□□□ 0.071e-6■□□□□ 8.5
COL16A1-217ENST00000532877 MTMR12Q9C0I1 747 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 TMEM117Q9H0C3 514 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 TMEM8AQ9HCN3 771 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 RTN4Q9NQC3 1192 aaKnown RBP15.47■□□□□ 0.07
COL16A1-217ENST00000532877 INTS13Q9NVM9 706 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 LRFN2Q9ULH4 789 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 PLAGL2Q9UPG8 496 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms