RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 DPYDQ12882 1025 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 TFDP2Q14188 446 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 PGBD3Q8N328 593 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 PDCD6IPQ8WUM4 868 aaKnown RBP9.23□□□□□ -0.93
CTNND1-232ENST00000532649 TUBB6Q9BUF5 446 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 TMX2Q9Y320 296 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 CCDC151A5D8V7 595 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 SUPT3HB4E1H0 165 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 KRT7P08729 469 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 RPA1P27694 616 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 PEX19P40855 299 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 GCLCP48506 637 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-232ENST00000532649 CASP7P55210 303 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 NPEPPSP55786 919 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 ACTR2P61160 394 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 SLC7A5Q01650 507 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 APBA1Q02410 837 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 GTF2H3Q13889 308 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 ZC2HC1CQ53FD0 456 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-232ENST00000532649 AARS2Q5JTZ9 985 aaKnown RBP9.23□□□□□ -0.93
CTNND1-232ENST00000532649 RRM2BQ7LG56 351 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 APPL2Q8NEU8 664 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 BTN2A2Q8WVV5 523 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 VPS39Q96JC1 886 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.23□□□□□ -0.934e-16■□□□□ 9.4
CTNND1-232ENST00000532649 UNC45AQ9H3U1 944 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 SYNGAP1Q96PV0 1343 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 GRIK1P39086 918 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 RBP5P82980 135 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 SNRNP35Q16560 246 aaKnown RBP9.23□□□□□ -0.93
CTNND1-232ENST00000532649 RBBP7Q16576 425 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 ATF7IP2Q5U623 682 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 BTBD8Q5XKL5 378 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 FAM83AQ86UY5 434 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 SPATA2LQ8IUW3 424 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-232ENST00000532649 ULK4Q96C45 1275 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 GLT1D1Q96MS3 346 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 DACH2Q96NX9 599 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 TSSK1BQ9BXA7 367 aa9.23□□□□□ -0.93
CTNND1-232ENST00000532649 SALL1Q9NSC2 1324 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 CFAP69A5D8W1 941 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 SYCE1LA8MT33 242 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 E5RI56 91 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 MSH4O15457 936 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 CYP26A1O43174 497 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 SUN1O94901 812 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 MCF2P10911 925 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 ITGA4P13612 1032 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 FXR2P51116 673 aaKnown RBP eCLIP9.22□□□□□ -0.932e-8■■■□□ 16.9
CTNND1-232ENST00000532649 TRIM72Q6ZMU5 477 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 GLYCTKQ8IVS8 523 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 PPHLN1Q8NEY8 458 aaKnown RBP9.22□□□□□ -0.93
CTNND1-232ENST00000532649 RNF25Q96BH1 459 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-232ENST00000532649 ASIC4Q96FT7 647 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 KLC2Q9H0B6 622 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 DNAJC17Q9NVM6 304 aaKnown RBP9.22□□□□□ -0.93
CTNND1-232ENST00000532649 CPA4Q9UI42 421 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 RRN3P2A6NIE6 340 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 TFRCP02786 760 aaKnown RBP9.22□□□□□ -0.93
CTNND1-232ENST00000532649 MT-ND3P03897 115 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 CACNB2Q08289 660 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-232ENST00000532649 TMEM259Q4ZIN3 620 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 MEI1Q5TIA1 1274 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 USP49Q70CQ1 688 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 DDX53Q86TM3 631 aaKnown RBP9.22□□□□□ -0.93
CTNND1-232ENST00000532649 PDIK1LQ8N165 341 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 GMCL1P1Q8NEA9 526 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 B4GALNT2Q8NHY0 566 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 FSD1LQ9BXM9 530 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 IP6K2Q9UHH9 426 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 DIS3Q9Y2L1 958 aaKnown RBP9.22□□□□□ -0.93
CTNND1-232ENST00000532649 WNT10BO00744 389 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 CFLARO15519 480 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 ZSCAN9O15535 394 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-232ENST00000532649 SLC37A4O43826 429 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 RHOBTB3O94955 611 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 CATSPER3Q86XQ3 398 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 GPC2Q8N158 579 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 MROH8Q9H579 483 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 SPATS2LQ9NUQ6 558 aaKnown RBP9.22□□□□□ -0.93
CTNND1-232ENST00000532649 TBK1Q9UHD2 729 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 COPG1Q9Y678 874 aaKnown RBP9.22□□□□□ -0.93
CTNND1-232ENST00000532649 MYBL1P10243 752 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 PSMA3P25788 255 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 NCOA4Q13772 614 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 NBPF20Q3BBV1 942 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 EFHC2Q5JST6 749 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 DAGLBQ8NCG7 672 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 GMCL1Q96IK5 515 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 CASS4Q9NQ75 786 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 CAPN7Q9Y6W3 813 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 PIK3R2O00459 728 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 CENPUQ71F23 418 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 NUDCD3Q8IVD9 361 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 FBXO16Q8IX29 292 aaPredicted RBP9.22□□□□□ -0.93
CTNND1-232ENST00000532649 TTC13Q8NBP0 860 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 SH3TC2Q8TF17 1288 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 PYROXD1Q8WU10 500 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 ASPSCR1Q9BZE9 553 aa9.22□□□□□ -0.93
CTNND1-232ENST00000532649 SIK2Q9H0K1 926 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms