RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 GOLGA7BQ2TAP0 167 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 TDRD10Q5VZ19 366 aaKnown RBP8.46□□□□□ -1.06
CTNND1-230ENST00000532245 HDXQ7Z353 690 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 CBWD2Q8IUF1 395 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 PPP4R1Q8TF05 950 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 TSC1Q92574 1164 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 C18orf8Q96DM3 657 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 FSD1LQ9BXM9 530 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 PLEKHA5Q9HAU0 1116 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 PLCB1Q9NQ66 1216 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 APEX2Q9UBZ4 518 aa8.46□□□□□ -1.06
CTNND1-230ENST00000532245 EFCAB8A8MWE9 144 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 ZBTB39O15060 712 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 CA12O43570 354 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 PMLP29590 882 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 TOB1P50616 345 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-230ENST00000532245 COG7P83436 770 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 OTOP1Q7RTM1 612 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 CPLX4Q7Z7G2 160 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 IFNL1Q8IU54 200 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 AFAP1L2Q8N4X5 818 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 EXOC4Q96A65 974 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 TMEM8AQ9HCN3 771 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 RNF19AQ9NV58 838 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 VPS18Q9P253 973 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 AKAP12Q02952 1782 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 ECEL1O95672 775 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 VIMP08670 466 aaKnown RBP8.45□□□□□ -1.06
CTNND1-230ENST00000532245 CXCL8P10145 99 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 PDE1BQ01064 536 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 CCDC60Q8IWA6 550 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-230ENST00000532245 DCLK2Q8N568 766 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 SLAIN1Q8ND83 568 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 KCNB2Q92953 911 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 CBWD1Q9BRT8 395 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 NIF3L1Q9GZT8 377 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 FAM200BP0CF97 657 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 CASP4P49662 377 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 RAB27AP51159 221 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 AP1B1Q10567 949 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 GIT2Q14161 759 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 EARS2Q5JPH6 523 aaKnown RBP8.45□□□□□ -1.06
CTNND1-230ENST00000532245 BBOF1Q8ND07 529 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 IL31RAQ8NI17 732 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 SLC5A5Q92911 643 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 ASIC4Q96FT7 647 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 KANSL3Q9P2N6 904 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 RIPK3Q9Y572 518 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 CDY2AQ9Y6F7 541 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 PGRMC1O00264 195 aaKnown RBP8.45□□□□□ -1.06
CTNND1-230ENST00000532245 ZRANB2O95218 330 aaKnown RBP eCLIP8.45□□□□□ -1.067e-11■■■■■ 70
CTNND1-230ENST00000532245 KRT3P12035 628 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 RAD51Q06609 339 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 STILQ15468 1287 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 KRT71Q3SY84 523 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 C6orf163Q5TEZ5 329 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 TRIM72Q6ZMU5 477 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 C7orf61Q8IZ16 206 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 MCUQ8NE86 351 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 AP1M1Q9BXS5 423 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 ABHD10Q9NUJ1 306 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 NRCAMQ92823 1304 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 SLITRK3O94933 977 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 INHAP05111 366 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 GUCY2DQ02846 1103 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 NBPF20Q3BBV1 942 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 EPC2Q52LR7 807 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 ARFGAP2Q8N6H7 521 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 MGARPQ8TDB4 240 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 PPP1R13BQ96KQ4 1090 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 MED15Q96RN5 788 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 SMC6Q96SB8 1091 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 CYP4F11Q9HBI6 524 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 IP6K2Q9UHH9 426 aa8.45□□□□□ -1.06
CTNND1-230ENST00000532245 TJP3O95049 919 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 S100BP04271 92 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-230ENST00000532245 GSTA1P08263 222 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 GSTA2P09210 222 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 MUTP22033 750 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 ELF2Q15723 593 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 FAM171A1Q5VUB5 890 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 NIPA1Q7RTP0 329 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 PANX2Q96RD6 677 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 POP1Q99575 1024 aaKnown RBP8.44□□□□□ -1.06
CTNND1-230ENST00000532245 AGPAT1Q99943 283 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 MUC3BQ9H195 1237 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 PARVAQ9NVD7 372 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 BTBD7Q9P203 1132 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 RGS17Q9UGC6 210 aaPredicted RBP8.44□□□□□ -1.06
CTNND1-230ENST00000532245 TTC26A0AVF1 554 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 POC1B-GALNT4F8VUJ3 575 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 EML1O00423 815 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 SOCS7O14512 581 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 CKMP06732 381 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 MYL4P12829 197 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 PDGFRAP16234 1089 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 BRD2P25440 801 aaKnown RBP8.44□□□□□ -1.06
CTNND1-230ENST00000532245 CTNNA1P35221 906 aaKnown RBP8.44□□□□□ -1.06
CTNND1-230ENST00000532245 RARRES1P49788 294 aa8.44□□□□□ -1.06
CTNND1-230ENST00000532245 EDRF1Q3B7T1 1238 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms