RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 C2CD2Q9Y426 696 aa15.73■□□□□ 0.11
CPSF1-206ENST00000531480 REV3LO60673 3130 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 TMEM189-UBE2V1I3L0A0 370 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 NRP1O14786 923 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 CLIC2O15247 247 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 MAPK13O15264 365 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 CALUO43852 315 aaPredicted RBP15.72■□□□□ 0.11
CPSF1-206ENST00000531480 IL18RAPO95256 599 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 ITGB1P05556 798 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 FOSL2P15408 326 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 WNT7BP56706 349 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 UBE3AQ05086 875 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 PPP2R3AQ06190 1150 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 TMEM173Q86WV6 379 aaPredicted RBP15.72■□□□□ 0.11
CPSF1-206ENST00000531480 NT5DC4Q86YG4 428 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 RNF168Q8IYW5 571 aaPredicted RBP15.72■□□□□ 0.11
CPSF1-206ENST00000531480 SPPL3Q8TCT6 385 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 ARNTL2Q8WYA1 636 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 DHTKD1Q96HY7 919 aaPredicted RBP15.72■□□□□ 0.11
CPSF1-206ENST00000531480 IGSF21Q96ID5 467 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 MFSD14AQ96MC6 490 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 UROC1Q96N76 676 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 FAM193BQ96PV7 902 aaPredicted RBP15.72■□□□□ 0.11
CPSF1-206ENST00000531480 LMAN2LQ9H0V9 348 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 CERS4Q9HA82 394 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 MARCH5Q9NX47 278 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 SPG21Q9NZD8 308 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 LMCD1Q9NZU5 365 aa15.72■□□□□ 0.11
CPSF1-206ENST00000531480 ZNF233A6NK53 670 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 DLL1O00548 723 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 FGF18O76093 207 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 NR3C1P04150 777 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 ALDH2P05091 517 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 CCNE1P24864 410 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 LRPAP1P30533 357 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 PBX3P40426 434 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 LRRC63Q05C16 580 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 CAMK1Q14012 370 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 SNRNP35Q16560 246 aaKnown RBP15.71■□□□□ 0.11
CPSF1-206ENST00000531480 UPP1Q16831 310 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 GLRA4Q5JXX5 417 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 CD300LGQ6UXG3 332 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 CBWD2Q8IUF1 395 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 MAFAQ8NHW3 353 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-206ENST00000531480 BCL7CQ8WUZ0 217 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-206ENST00000531480 GZF1Q9H116 711 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-206ENST00000531480 PRDM12Q9H4Q4 367 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 RBAKQ9NYW8 714 aaPredicted RBP15.71■□□□□ 0.11
CPSF1-206ENST00000531480 STK39Q9UEW8 545 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 MTUS1Q9ULD2 1270 aa15.71■□□□□ 0.11
CPSF1-206ENST00000531480 UBQLN1Q9UMX0 589 aaKnown RBP15.71■□□□□ 0.11
CPSF1-206ENST00000531480 GOLGA8IPA6NC78 632 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 GOLGA8JA6NMD2 632 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 BIN1O00499 593 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 PSMA7O14818 248 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 RPL9P32969 192 aaKnown RBP15.7■□□□□ 0.1
CPSF1-206ENST00000531480 PMS1P54277 932 aaKnown RBP15.7■□□□□ 0.1
CPSF1-206ENST00000531480 CLDN10P78369 228 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 ENPEPQ07075 957 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 CYP24A1Q07973 514 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 GPM6BQ13491 265 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 STIM1Q13586 685 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 ADGRE1Q14246 886 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 PSMD6Q15008 389 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 KLHL40Q2TBA0 621 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 SPOUT1Q5T280 376 aaKnown RBP15.7■□□□□ 0.1
CPSF1-206ENST00000531480 SPATA1Q5VX52 437 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 ISM2Q6H9L7 571 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 JADE1Q6IE81 842 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 DDX53Q86TM3 631 aaKnown RBP15.7■□□□□ 0.1
CPSF1-206ENST00000531480 EFCAB13Q8IY85 973 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 GDPD5Q8WTR4 605 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 C18orf25Q96B23 403 aaPredicted RBP15.7■□□□□ 0.1
CPSF1-206ENST00000531480 DDX27Q96GQ7 796 aaKnown RBP15.7■□□□□ 0.1
CPSF1-206ENST00000531480 PAAF1Q9BRP4 392 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 VN1R3Q9BXE9 311 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 FAN1Q9Y2M0 1017 aa15.7■□□□□ 0.1
CPSF1-206ENST00000531480 VWA8A3KMH1 1905 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 NT5C1B-RDH14C9J2C7 533 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 RFXAPO00287 272 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 GRM6O15303 877 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 EXOC3O60645 756 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 NFICP08651 508 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 NR2F2P24468 414 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 DNAJB1P25685 340 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 RPL13P26373 211 aaKnown RBP15.69■□□□□ 0.1
CPSF1-206ENST00000531480 CYP2J2P51589 502 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 TMEM132DQ14C87 1099 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 SURF1Q15526 300 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 CCDC183Q5T5S1 534 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 ANKRD40Q6AI12 368 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 TTI2Q6NXR4 508 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.69■□□□□ 0.1
CPSF1-206ENST00000531480 MLKLQ8NB16 471 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 CXorf38Q8TB03 319 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 KIF12Q96FN5 646 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 MKNK1Q9BUB5 465 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 TMEM63CQ9P1W3 806 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 TUBGCP4Q9UGJ1 667 aa15.69■□□□□ 0.1
CPSF1-206ENST00000531480 SCN1AP35498 2009 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms