RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 EFNA5P52803 228 aa20.26■□□□□ 0.83
SSSCA1-206ENST00000531405 ORC2Q13416 577 aaPredicted RBP20.26■□□□□ 0.83
SSSCA1-206ENST00000531405 SNW1Q13573 536 aaKnown RBP20.26■□□□□ 0.83
SSSCA1-206ENST00000531405 C4orf32Q8N8J7 132 aa20.26■□□□□ 0.83
SSSCA1-206ENST00000531405 ING5Q8WYH8 240 aa20.26■□□□□ 0.83
SSSCA1-206ENST00000531405 KIFAP3Q92845 792 aa20.26■□□□□ 0.83
SSSCA1-206ENST00000531405 KXD1Q9BQD3 176 aa20.26■□□□□ 0.83
SSSCA1-206ENST00000531405 DDX19AQ9NUU7 478 aaKnown RBP20.26■□□□□ 0.83
SSSCA1-206ENST00000531405 DNMT3BQ9UBC3 853 aaKnown RBP20.26■□□□□ 0.83
SSSCA1-206ENST00000531405 ANK1P16157 1881 aa20.25■□□□□ 0.83
SSSCA1-206ENST00000531405 MUTP22033 750 aa20.25■□□□□ 0.83
SSSCA1-206ENST00000531405 RBM25P49756 843 aaKnown RBP20.25■□□□□ 0.83
SSSCA1-206ENST00000531405 FXR2P51116 673 aaKnown RBP eCLIP20.25■□□□□ 0.83
SSSCA1-206ENST00000531405 STARD6P59095 220 aa20.25■□□□□ 0.83
SSSCA1-206ENST00000531405 OSTNP61366 133 aa20.25■□□□□ 0.83
SSSCA1-206ENST00000531405 SOX4Q06945 474 aaPredicted RBP20.25■□□□□ 0.83
SSSCA1-206ENST00000531405 UPP1Q16831 310 aa20.25■□□□□ 0.83
SSSCA1-206ENST00000531405 MTSS1LQ765P7 747 aa20.25■□□□□ 0.83
SSSCA1-206ENST00000531405 DDX27Q96GQ7 796 aaKnown RBP20.25■□□□□ 0.83
SSSCA1-206ENST00000531405 LRWD1Q9UFC0 647 aa20.25■□□□□ 0.83
SSSCA1-206ENST00000531405 LIMCH1Q9UPQ0 1083 aa20.25■□□□□ 0.83
SSSCA1-206ENST00000531405 TICRRQ7Z2Z1 1910 aa20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 SMIM28A0A1B0GU29 152 aa20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 CCDC169A6NNP5 214 aa20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 K7ERI5 159 aa20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 LMNAP02545 664 aaKnown RBP20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 SP9P0CG40 484 aa20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 PEX3P56589 373 aa20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 GNL2Q13823 731 aaKnown RBP20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 PABPC1LQ4VXU2 614 aaKnown RBP20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 C1orf210Q8IVY1 113 aa20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 NPAS3Q8IXF0 933 aa20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 FBXO18Q8NFZ0 1043 aa20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 CDT1Q9H211 546 aa20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 TNFSF13BQ9Y275 285 aa20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 CEP250Q9BV73 2442 aa20.24■□□□□ 0.83
SSSCA1-206ENST00000531405 E9PMD0 336 aa20.23■□□□□ 0.83
SSSCA1-206ENST00000531405 ID4P47928 161 aa20.23■□□□□ 0.83
SSSCA1-206ENST00000531405 UVSSAQ2YD98 709 aa20.23■□□□□ 0.83
SSSCA1-206ENST00000531405 ZNF568Q3ZCX4 644 aa20.23■□□□□ 0.83
SSSCA1-206ENST00000531405 DAW1Q8N136 415 aa20.23■□□□□ 0.83
SSSCA1-206ENST00000531405 SNX29Q8TEQ0 813 aa20.23■□□□□ 0.83
SSSCA1-206ENST00000531405 UROC1Q96N76 676 aa20.23■□□□□ 0.83
SSSCA1-206ENST00000531405 ACO2Q99798 780 aaKnown RBP20.23■□□□□ 0.83
SSSCA1-206ENST00000531405 LLPHQ9BRT6 129 aaKnown RBP20.23■□□□□ 0.83
SSSCA1-206ENST00000531405 PPP4R2Q9NY27 417 aa20.23■□□□□ 0.83
SSSCA1-206ENST00000531405 MTF2Q9Y483 593 aaPredicted RBP20.23■□□□□ 0.83
SSSCA1-206ENST00000531405 PHLPP2Q6ZVD8 1323 aa20.23■□□□□ 0.83
SSSCA1-206ENST00000531405 PP2D1A8MPX8 630 aa20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 POU2F2P09086 479 aa20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 GRM5P41594 1212 aa20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 NPTX2P47972 431 aa20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 MLF2Q15773 248 aaPredicted RBP20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 SLC5A9Q2M3M2 681 aa20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 SLC44A4Q53GD3 710 aa20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 POTEHQ6S545 545 aa20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 ANKS3Q6ZW76 656 aa20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 TAS1R3Q7RTX0 852 aa20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 APBB1IPQ7Z5R6 666 aaPredicted RBP20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 SHDQ96IW2 340 aa20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 ZMAT2Q96NC0 199 aaKnown RBP20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 CCDC94Q9BW85 323 aaPredicted RBP20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 NOL7Q9UMY1 257 aaKnown RBP20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 BACE2Q9Y5Z0 518 aa20.22■□□□□ 0.83
SSSCA1-206ENST00000531405 KANSL1LA0AUZ9 987 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 TRAPPC3O43617 180 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 HIP1RO75146 1068 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 CD72P21854 359 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 TRAPPC10P48553 1259 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 TOB1P50616 345 aaPredicted RBP20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 YARSP54577 528 aaKnown RBP20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 ROR1Q01973 937 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 PTGDRQ13258 359 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 UBXN2BQ14CS0 331 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 ALKAL1Q6UXT8 129 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 MAML2Q8IZL2 1156 aaPredicted RBP20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 IGSF22Q8N9C0 903 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 MCRS1Q96EZ8 462 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 DDX23Q9BUQ8 820 aaKnown RBP20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 RUSC1Q9BVN2 902 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 TARS2Q9BW92 718 aaKnown RBP20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 SEMA4AQ9H3S1 761 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 PTPRHQ9HD43 1115 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 TOPORSQ9NS56 1045 aaPredicted RBP20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 KCNH3Q9ULD8 1083 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 MRPS23Q9Y3D9 190 aaKnown RBP20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 PCDHB6Q9Y5E3 794 aa20.21■□□□□ 0.83
SSSCA1-206ENST00000531405 GPR179Q6PRD1 2367 aa20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 COL4A2P08572 1712 aa20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 WDR27A2RRH5 827 aa20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 PODXLO00592 558 aa20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 RHOP08100 348 aa20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 CEBPBP17676 345 aa20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 CDC25AP30304 524 aa20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 ARPP19P56211 112 aa20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 FOXK2Q01167 660 aa20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 PDIA5Q14554 519 aa20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 XKR4Q5GH76 650 aa20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 VARS2Q5ST30 1063 aaKnown RBP20.2■□□□□ 0.82
SSSCA1-206ENST00000531405 FAM184AQ8NB25 1140 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms