RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.7■□□□□ 0.9
PACSIN3-208ENST00000531226 HLA-CQ95604 372 aa20.7■□□□□ 0.9
PACSIN3-208ENST00000531226 PABPC5Q96DU9 382 aaKnown RBP20.7■□□□□ 0.9
PACSIN3-208ENST00000531226 IPO9Q96P70 1041 aaKnown RBP20.7■□□□□ 0.9
PACSIN3-208ENST00000531226 GOLGA2P5Q9HBQ8 144 aa20.7■□□□□ 0.9
PACSIN3-208ENST00000531226 IRAK3Q9Y616 596 aa20.7■□□□□ 0.9
PACSIN3-208ENST00000531226 SCN1AP35498 2009 aa20.7■□□□□ 0.9
PACSIN3-208ENST00000531226 TCF20Q9UGU0 1960 aaKnown RBP20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 C2orf71A6NGG8 1288 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 HIDE1A8MVS5 230 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 LACTBL1A8MY62 500 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 TMEM189-UBE2V1I3L0A0 370 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 KIF4AO95239 1232 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 GTF2F1P35269 517 aaKnown RBP eCLIP20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 NRIP1P48552 1158 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 POU5F1Q01860 360 aaKnown RBP20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 DUSP6Q16828 381 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 UPP1Q16831 310 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 ARMCX5Q6P1M9 558 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 RBM23Q86U06 439 aaKnown RBP20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 CD302Q8IX05 232 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 MRPL43Q8N983 215 aaKnown RBP20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 KIAA0895Q8NCT3 520 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 CCDC47Q96A33 483 aaKnown RBP20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 TSPAN18Q96SJ8 248 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 CDCA3Q99618 268 aaPredicted RBP20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 CBWD1Q9BRT8 395 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 TLE6Q9H808 572 aa20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 UBE2ZQ9H832 354 aaPredicted RBP20.69■□□□□ 0.9
PACSIN3-208ENST00000531226 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 FSD2A1L4K1 749 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 KIAA0391O15091 583 aaKnown RBP20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 GADD45BO75293 160 aaPredicted RBP20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 TADA2AO75478 443 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 CXCL14O95715 111 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 LDHAP00338 332 aaKnown RBP20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 CA8P35219 290 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 CLCNKBP51801 687 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 STK4Q13043 487 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 CTC1Q2NKJ3 1217 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 CRELD2Q6UXH1 353 aaPredicted RBP20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 NELFCDQ8IXH7 590 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 EFHBQ8N7U6 833 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 HASPINQ8TF76 798 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 C18orf25Q96B23 403 aaPredicted RBP20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 SAAL1Q96ER3 474 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 KIF12Q96FN5 646 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 DDX27Q96GQ7 796 aaKnown RBP20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 TIGD1Q96MW7 591 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 GPR62Q9BZJ7 368 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 IGFLR1Q9H665 355 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 CLDND1Q9NY35 253 aa20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 SF3B1O75533 1304 aaKnown RBP eCLIP20.68■□□□□ 0.9
PACSIN3-208ENST00000531226 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 PER2O15055 1255 aa20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 RHOBTB3O94955 611 aa20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 URODP06132 367 aa20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 SPAG1Q07617 926 aa20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 KCNB1Q14721 858 aa20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 PTPN14Q15678 1187 aa20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 ZBTB6Q15916 424 aa20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 DCLRE1AQ6PJP8 1040 aa20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 AUTS2Q8WXX7 1259 aa20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 FAM212AQ96EL1 285 aa20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 ASB7Q9H672 318 aa20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 TUBGCP4Q9UGJ1 667 aa20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 UBQLN1Q9UMX0 589 aaKnown RBP20.67■□□□□ 0.9
PACSIN3-208ENST00000531226 PODXLO00592 558 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 TGFB1I1O43294 461 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 XPOTO43592 962 aaKnown RBP20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 EXTL3O43909 919 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 B3GAT3O94766 335 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 CYP3A5P20815 502 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 RPL9P32969 192 aaKnown RBP20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 GLUD2P49448 558 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 SNRPFP62306 86 aaKnown RBP20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 ELAVL2Q12926 359 aaKnown RBP20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 KNOP1Q1ED39 458 aaKnown RBP20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 JADE1Q6IE81 842 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 TAS1R1Q7RTX1 841 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 BRSK2Q8IWQ3 736 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 GPD1LQ8N335 351 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 C3orf58Q8NDZ4 430 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 ZSWIM2Q8NEG5 633 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 ATXN2LQ8WWM7 1075 aaKnown RBP20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 FAM213AQ9BRX8 229 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 PCIF1Q9H4Z3 704 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 MRPL17Q9NRX2 175 aaKnown RBP20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 AGPAT3Q9NRZ7 376 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 CHST7Q9NS84 486 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 SSX2IPQ9Y2D8 614 aa20.66■□□□□ 0.9
PACSIN3-208ENST00000531226 TSC2P49815 1807 aa20.65■□□□□ 0.9
PACSIN3-208ENST00000531226 LINC01565O15544 149 aa20.65■□□□□ 0.9
PACSIN3-208ENST00000531226 LILRB3O75022 631 aa20.65■□□□□ 0.9
PACSIN3-208ENST00000531226 IL18RAPO95256 599 aa20.65■□□□□ 0.9
PACSIN3-208ENST00000531226 NFICP08651 508 aa20.65■□□□□ 0.9
PACSIN3-208ENST00000531226 LRPAP1P30533 357 aa20.65■□□□□ 0.9
PACSIN3-208ENST00000531226 DSG1Q02413 1049 aa20.65■□□□□ 0.9
PACSIN3-208ENST00000531226 TFF2Q03403 129 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms