RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 ICAM4Q14773 271 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 RBBP5Q15291 538 aaKnown RBP6.38□□□□□ -1.39
CD44-231ENST00000531110 MST1LQ2TV78 715 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 TOR2AQ5JU69 321 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 CAVIN1Q6NZI2 390 aaKnown RBP6.38□□□□□ -1.39
CD44-231ENST00000531110 MYOCDQ8IZQ8 938 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 PPM1EQ8WY54 764 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 MTMR8Q96EF0 704 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 FAM89AQ96GI7 184 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 LOXL4Q96JB6 756 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 RPL10LQ96L21 214 aaKnown RBP6.38□□□□□ -1.39
CD44-231ENST00000531110 OR14A2Q96R54 314 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 TCF25Q9BQ70 676 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 ACE2Q9BYF1 805 aaPredicted RBP6.38□□□□□ -1.39
CD44-231ENST00000531110 FAM107BQ9H098 131 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 PSD3Q9NYI0 1048 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 RCAN3Q9UKA8 241 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 ITGB1BP2Q9UKP3 347 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 ODF2LQ9ULJ1 636 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 TCAF1Q9Y4C2 921 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 MIA2Q96PC5 1412 aa6.38□□□□□ -1.39
CD44-231ENST00000531110 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 FZD9O00144 591 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 ERLIN1O75477 346 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 TPM1P09493 284 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 HARSP12081 509 aaKnown RBP6.37□□□□□ -1.39
CD44-231ENST00000531110 YY1P25490 414 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 CRHR1P34998 444 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 RDXP35241 583 aaKnown RBP6.37□□□□□ -1.39
CD44-231ENST00000531110 IARSP41252 1262 aaKnown RBP6.37□□□□□ -1.39
CD44-231ENST00000531110 WASP42768 502 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 NAP1L1P55209 391 aaKnown RBP6.37□□□□□ -1.39
CD44-231ENST00000531110 NPEPPSP55786 919 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 INHBEP58166 350 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 GPS2Q13227 327 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 CRYMQ14894 314 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 UBE3CQ15386 1083 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 TTC31Q49AM3 519 aaPredicted RBP6.37□□□□□ -1.39
CD44-231ENST00000531110 BRDTQ58F21 947 aaPredicted RBP6.37□□□□□ -1.39
CD44-231ENST00000531110 FAM111BQ6SJ93 734 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 MAMDC4Q6UXC1 1216 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 MMS22LQ6ZRQ5 1243 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 TRIM74Q86UV6 250 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 TRIM73Q86UV7 250 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 CHST13Q8NET6 341 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 GPR156Q8NFN8 814 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 ZNF480Q8WV37 535 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 DVL3Q92997 716 aaPredicted RBP6.37□□□□□ -1.39
CD44-231ENST00000531110 FAXDC2Q96IV6 333 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 WWC2-AS2Q96NR7 200 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 PDCD2LQ9BRP1 358 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 KRTAP3-1Q9BYR8 98 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 TRIM7Q9C029 511 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 HOMER3Q9NSC5 361 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 RBM12Q9NTZ6 932 aaKnown RBP6.37□□□□□ -1.39
CD44-231ENST00000531110 ING3Q9NXR8 418 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 QPCTLQ9NXS2 382 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 CTNNA3Q9UI47 895 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 ZBTB21Q9ULJ3 1066 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 NUDCQ9Y266 331 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 TESMINQ9Y4I5 508 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 MRFAP1Q9Y605 127 aa6.37□□□□□ -1.39
CD44-231ENST00000531110 PLEKHG2Q9H7P9 1386 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 NCANO14594 1321 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 C1QTNF3-AMACRE9PGA6 284 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 MYO1CO00159 1063 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 CYP27B1O15528 508 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 ATP8B1O43520 1251 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 TPPPO94811 219 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 CCDC175P0C221 793 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 FAM163BP0C2L3 166 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 VCAM1P19320 739 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 CHMLP26374 656 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 MCAMP43121 646 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 DUSP2Q05923 314 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 DEUP1Q05D60 604 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 MGAT2Q10469 447 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 FOXL1Q12952 345 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 GRIK3Q13003 919 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 METTL24Q5JXM2 366 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 TEX35Q5T0J7 233 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 CLEC17AQ6ZS10 378 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 ANKRD35Q8N283 1001 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 FUBP3Q96I24 572 aaKnown RBP eCLIP6.36□□□□□ -1.39
CD44-231ENST00000531110 RETREG1Q9H6L5 497 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 SPATS2LQ9NUQ6 558 aaKnown RBP6.36□□□□□ -1.39
CD44-231ENST00000531110 MKS1Q9NXB0 559 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 DDX56Q9NY93 547 aaKnown RBP6.36□□□□□ -1.39
CD44-231ENST00000531110 SWAP70Q9UH65 585 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 USP25Q9UHP3 1055 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 BLOC1S6Q9UL45 172 aa6.36□□□□□ -1.39
CD44-231ENST00000531110 BAZ1BQ9UIG0 1483 aaKnown RBP6.35□□□□□ -1.39
CD44-231ENST00000531110 ROCK2O75116 1388 aaKnown RBP6.35□□□□□ -1.39
CD44-231ENST00000531110 SPAG9O60271 1321 aaKnown RBP6.35□□□□□ -1.39
CD44-231ENST00000531110 UBE2QL1A1L167 161 aa6.35□□□□□ -1.39
CD44-231ENST00000531110 FAM171A2A8MVW0 826 aa6.35□□□□□ -1.39
CD44-231ENST00000531110 B8ZZF3 427 aa6.35□□□□□ -1.39
CD44-231ENST00000531110 PDLIM1O00151 329 aa6.35□□□□□ -1.39
CD44-231ENST00000531110 PRRG2O14669 202 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms