RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 ZNF233A6NK53 670 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 LACTBL1A8MY62 500 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 PRR33A8MZF0 331 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 CLIC2O15247 247 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 IL18RAPO95256 599 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 PLCB3Q01970 1234 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 KRT17Q04695 432 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 UBE3AQ05086 875 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 NFIL3Q16649 462 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 SPRED2Q7Z698 418 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 SMYD4Q8IYR2 804 aaPredicted RBP16.62■□□□□ 0.25
CCS-206ENST00000530961 ADSSL1Q8N142 457 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 KLHL23Q8NBE8 558 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 XXYLT1Q8NBI6 393 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 SAAL1Q96ER3 474 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 DMAC2Q9NW81 257 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 STK39Q9UEW8 545 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 PLAGL2Q9UPG8 496 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 DERAQ9Y315 318 aa16.62■□□□□ 0.25
CCS-206ENST00000530961 TCF20Q9UGU0 1960 aaKnown RBP16.62■□□□□ 0.25
CCS-206ENST00000530961 NRP1O14786 923 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 PSMA7O14818 248 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 MEFVO15553 781 aaPredicted RBP16.61■□□□□ 0.25
CCS-206ENST00000530961 XPOTO43592 962 aaKnown RBP16.61■□□□□ 0.25
CCS-206ENST00000530961 FGF18O76093 207 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 CYP3A5P20815 502 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 RPL13P26373 211 aaKnown RBP16.61■□□□□ 0.25
CCS-206ENST00000530961 SLC11A1P49279 550 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 GPM6BQ13491 265 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 NAB2Q15742 525 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 GLRA4Q5JXX5 417 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 NT5DC4Q86YG4 428 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 BRSK2Q8IWQ3 736 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 SLC39A11Q8N1S5 342 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 DDX27Q96GQ7 796 aaKnown RBP16.61■□□□□ 0.25
CCS-206ENST00000530961 DHTKD1Q96HY7 919 aaPredicted RBP16.61■□□□□ 0.25
CCS-206ENST00000530961 UROC1Q96N76 676 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 ZMAT2Q96NC0 199 aaKnown RBP16.61■□□□□ 0.25
CCS-206ENST00000530961 COLEC11Q9BWP8 271 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 LMAN2LQ9H0V9 348 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 KCNH6Q9H252 994 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 CXCL16Q9H2A7 254 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 RBAKQ9NYW8 714 aaPredicted RBP16.61■□□□□ 0.25
CCS-206ENST00000530961 LMCD1Q9NZU5 365 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 DNAJB4Q9UDY4 337 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 PUF60Q9UHX1 559 aaKnown RBP16.61■□□□□ 0.25
CCS-206ENST00000530961 LZTS1Q9Y250 596 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 C2CD2Q9Y426 696 aa16.61■□□□□ 0.25
CCS-206ENST00000530961 GOLGA8IPA6NC78 632 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 EPOPA6NHQ4 379 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 GOLGA8JA6NMD2 632 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 BIN1O00499 593 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 EXOC3O60645 756 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 NR3C1P04150 777 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 POU3F3P20264 500 aaPredicted RBP16.6■□□□□ 0.25
CCS-206ENST00000530961 RPL9P32969 192 aaKnown RBP16.6■□□□□ 0.25
CCS-206ENST00000530961 OR1G1P47890 313 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 CYP2J2P51589 502 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 SURF1Q15526 300 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 ZBTB6Q15916 424 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 SNRNP35Q16560 246 aaKnown RBP16.6■□□□□ 0.25
CCS-206ENST00000530961 PTPROQ16827 1216 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 EDRF1Q3B7T1 1238 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 ISM2Q6H9L7 571 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 CENPPQ6IPU0 288 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 FAM212AQ96EL1 285 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 KIF12Q96FN5 646 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 TMEM169Q96HH4 297 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 IGSF21Q96ID5 467 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 TSG101Q99816 390 aa16.6■□□□□ 0.25
CCS-206ENST00000530961 UBQLN1Q9UMX0 589 aaKnown RBP16.6■□□□□ 0.25
CCS-206ENST00000530961 B4GALT3O60512 393 aa16.59■□□□□ 0.25
CCS-206ENST00000530961 ITGB1P05556 798 aa16.59■□□□□ 0.25
CCS-206ENST00000530961 BMP6P22004 513 aa16.59■□□□□ 0.25
CCS-206ENST00000530961 PBX3P40426 434 aa16.59■□□□□ 0.25
CCS-206ENST00000530961 KCNQ1P51787 676 aa16.59■□□□□ 0.25
CCS-206ENST00000530961 LRRC63Q05C16 580 aa16.59■□□□□ 0.25
CCS-206ENST00000530961 ZCWPW2Q504Y3 356 aa16.59■□□□□ 0.25
CCS-206ENST00000530961 DCLRE1AQ6PJP8 1040 aa16.59■□□□□ 0.25
CCS-206ENST00000530961 FOXR2Q6PJQ5 311 aa16.59■□□□□ 0.25
CCS-206ENST00000530961 CBWD2Q8IUF1 395 aa16.59■□□□□ 0.25
CCS-206ENST00000530961 MLKLQ8NB16 471 aa16.59■□□□□ 0.25
CCS-206ENST00000530961 ZSWIM2Q8NEG5 633 aa16.59■□□□□ 0.25
CCS-206ENST00000530961 SPPL3Q8TCT6 385 aa16.59■□□□□ 0.25
CCS-206ENST00000530961 NOC3LQ8WTT2 800 aaKnown RBP16.59■□□□□ 0.25
CCS-206ENST00000530961 CASTOR2A6NHX0 329 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 PPP1R3GB7ZBB8 358 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 NT5C1B-RDH14C9J2C7 533 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 RFXAPO00287 272 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 MAPK13O15264 365 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 LPXNO60711 386 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 NR2F2P24468 414 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 CCNE1P24864 410 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 TFF2Q03403 129 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 ADAM9Q13443 819 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 ADGRE1Q14246 886 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 BMS1Q14692 1282 aaKnown RBP16.58■□□□□ 0.24
CCS-206ENST00000530961 TMEM132DQ14C87 1099 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 UPP1Q16831 310 aa16.58■□□□□ 0.24
CCS-206ENST00000530961 CCDC183Q5T5S1 534 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms