RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 WHRNQ9P202 907 aa8.64□□□□□ -1.03
CSDE1-214ENST00000530886 ZMYM2Q9UBW7 1377 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 A0A088AWK7 358 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 FBP2O00757 339 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 OPHN1O60890 802 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 CDH16O75309 829 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 GSTT2P0CG29 244 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 GSTT2BP0CG30 244 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 AMPD3Q01432 767 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 KCNC4Q03721 635 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 ANKRD20A4Q4UJ75 823 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 C3orf67Q6ZVT6 689 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 MARVELD2Q8N4S9 558 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 C12orf50Q8NA57 414 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 TTLL11Q8NHH1 800 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 TTC25Q96NG3 672 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 TRAIPQ9BWF2 469 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 ITGB4P16144 1822 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 DENRO43583 198 aaKnown RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 CD48P09326 243 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 GNAT2P19087 354 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 PTK2Q05397 1052 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 THOC5Q13769 683 aaKnown RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 SPARCL1Q14515 664 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 ZNF423Q2M1K9 1284 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 ZNF571Q7Z3V5 609 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 ERI1Q8IV48 349 aaKnown RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 CCDC82Q8N4S0 544 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 GLG1Q92896 1179 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 MCUR1Q96AQ8 359 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 STK33Q9BYT3 514 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 SENP6Q9GZR1 1112 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 AAASQ9NRG9 546 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 PPP1R9AQ9ULJ8 1098 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 SLC4A4Q9Y6R1 1079 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 SYNGAP1Q96PV0 1343 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 SOBPA7XYQ1 873 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 LSM1O15116 133 aaKnown RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 PRKAB2O43741 272 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 TRMUO75648 421 aaKnown RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 TTC4O95801 387 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 VDRP11473 427 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 PTPN2P17706 415 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 TCF7P36402 384 aaPredicted RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 HADHBP55084 474 aaKnown RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 TCEAL1Q15170 157 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 SLC35G1Q2M3R5 365 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 TMEM63BQ5T3F8 832 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 KYAT3Q6YP21 454 aaKnown RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 DTHD1Q6ZMT9 781 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 OTUD6AQ7L8S5 288 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 DTX3LQ8TDB6 740 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 DDI1Q8WTU0 396 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 FAM172AQ8WUF8 416 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 SCFD1Q8WVM8 642 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 SKA1Q96BD8 255 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 CEP63Q96MT8 703 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 HGH1Q9BTY7 390 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 LSM14BQ9BX40 385 aaKnown RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 CRNKL1Q9BZJ0 848 aaKnown RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 SSU72Q9NP77 194 aaKnown RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 TAS2R1Q9NYW7 299 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 SMG5Q9UPR3 1016 aaKnown RBP8.63□□□□□ -1.03
CSDE1-214ENST00000530886 ZNF711Q9Y462 761 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 HEY1Q9Y5J3 304 aa8.63□□□□□ -1.03
CSDE1-214ENST00000530886 HAUS5O94927 633 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 VCLP18206 1134 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 STIP1P31948 543 aaKnown RBP8.62□□□□□ -1.03
CSDE1-214ENST00000530886 MCM7P33993 719 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 ARPC4P59998 168 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 MSLNQ13421 630 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-214ENST00000530886 RAPGEF1Q13905 1077 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 PCNX4Q63HM2 1172 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 ALKBH5Q6P6C2 394 aaKnown RBP8.62□□□□□ -1.03
CSDE1-214ENST00000530886 EPM2AIP1Q7L775 607 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-214ENST00000530886 PYROXD1Q8WU10 500 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 SGF29Q96ES7 293 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 HSPBAP1Q96EW2 488 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 COX4I2Q96KJ9 171 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 ZNF696Q9H7X3 374 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 UVRAGQ9P2Y5 699 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 CCPG1Q9ULG6 757 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 STX8Q9UNK0 236 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 GOLGA8TH3BQL2 631 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 EIF3FO00303 357 aaPredicted RBP8.62□□□□□ -1.03
CSDE1-214ENST00000530886 H2AFZP0C0S5 128 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 GOLGA8HP0CJ92 632 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 COL6A2P12110 1019 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 AMPD1P23109 780 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 APOFQ13790 326 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 PDK3Q15120 406 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 IL23RQ5VWK5 629 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 MFSD6Q6ZSS7 791 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 FAM47EQ6ZV65 393 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 H2AFVQ71UI9 128 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 MTDHQ86UE4 582 aaKnown RBP8.62□□□□□ -1.03
CSDE1-214ENST00000530886 LRRC6Q86X45 466 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 TDRPQ86YL5 185 aa8.62□□□□□ -1.03
CSDE1-214ENST00000530886 ZDHHC14Q8IZN3 488 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms