RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 FAM214AQ32MH5 1076 aa9.28□□□□□ -0.92
CSDE1-213ENST00000530784 ABHD15Q6UXT9 468 aa9.28□□□□□ -0.92
CSDE1-213ENST00000530784 Q6ZRM9 215 aa9.28□□□□□ -0.92
CSDE1-213ENST00000530784 DDX42Q86XP3 938 aaKnown RBP eCLIP9.28□□□□□ -0.92
CSDE1-213ENST00000530784 QRSL1Q9H0R6 528 aaKnown RBP9.28□□□□□ -0.92
CSDE1-213ENST00000530784 CYP27B1O15528 508 aa9.27□□□□□ -0.93
CSDE1-213ENST00000530784 SCNN1GP51170 649 aa9.27□□□□□ -0.93
CSDE1-213ENST00000530784 DUSP2Q05923 314 aa9.27□□□□□ -0.93
CSDE1-213ENST00000530784 VPS72Q15906 364 aa9.27□□□□□ -0.93
CSDE1-213ENST00000530784 RNF187Q5TA31 235 aaPredicted RBP9.27□□□□□ -0.93
CSDE1-213ENST00000530784 MFSD5Q6N075 450 aa9.27□□□□□ -0.93
CSDE1-213ENST00000530784 GSPT2Q8IYD1 628 aaKnown RBP9.27□□□□□ -0.93
CSDE1-213ENST00000530784 VPS11Q9H270 941 aa9.27□□□□□ -0.93
CSDE1-213ENST00000530784 NWD2Q9ULI1 1742 aa9.27□□□□□ -0.93
CSDE1-213ENST00000530784 TULP4Q9NRJ4 1543 aa9.26□□□□□ -0.93
CSDE1-213ENST00000530784 GPRASP1Q5JY77 1395 aa9.26□□□□□ -0.93
CSDE1-213ENST00000530784 KRTAP23-1A1A580 65 aa9.26□□□□□ -0.93
CSDE1-213ENST00000530784 HOXA3O43365 443 aaPredicted RBP9.26□□□□□ -0.93
CSDE1-213ENST00000530784 CTSSP25774 331 aa9.26□□□□□ -0.93
CSDE1-213ENST00000530784 WNT3AP56704 352 aa9.26□□□□□ -0.93
CSDE1-213ENST00000530784 CCT2P78371 535 aaKnown RBP9.26□□□□□ -0.93
CSDE1-213ENST00000530784 MRPS9P82933 396 aaKnown RBP9.26□□□□□ -0.93
CSDE1-213ENST00000530784 ZXDAP98168 799 aa9.26□□□□□ -0.93
CSDE1-213ENST00000530784 FOXE3Q13461 319 aa9.26□□□□□ -0.93
CSDE1-213ENST00000530784 RRP1BQ14684 758 aaKnown RBP9.26□□□□□ -0.93
CSDE1-213ENST00000530784 TSPEARQ8WU66 669 aa9.26□□□□□ -0.93
CSDE1-213ENST00000530784 KRTAP4-2Q9BYR5 136 aa9.26□□□□□ -0.93
CSDE1-213ENST00000530784 MCM8Q9UJA3 840 aa9.26□□□□□ -0.93
CSDE1-213ENST00000530784 RGPD8O14715 1765 aaPredicted RBP9.26□□□□□ -0.93
CSDE1-213ENST00000530784 MFAP3LO75121 409 aa9.25□□□□□ -0.93
CSDE1-213ENST00000530784 GPR3P46089 330 aa9.25□□□□□ -0.93
CSDE1-213ENST00000530784 MEF2AQ02078 507 aaPredicted RBP9.25□□□□□ -0.93
CSDE1-213ENST00000530784 CRHR2Q13324 411 aa9.25□□□□□ -0.93
CSDE1-213ENST00000530784 C19orf54Q5BKX5 351 aa9.25□□□□□ -0.93
CSDE1-213ENST00000530784 TOR2AQ5JU69 321 aa9.25□□□□□ -0.93
CSDE1-213ENST00000530784 CRIP3Q6Q6R5 217 aa9.25□□□□□ -0.93
CSDE1-213ENST00000530784 KCNK18Q7Z418 384 aa9.25□□□□□ -0.93
CSDE1-213ENST00000530784 MB21D1Q8N884 522 aa9.25□□□□□ -0.93
CSDE1-213ENST00000530784 SNX33Q8WV41 574 aa9.25□□□□□ -0.93
CSDE1-213ENST00000530784 AUTS2Q8WXX7 1259 aa9.25□□□□□ -0.93
CSDE1-213ENST00000530784 ZNF503Q96F45 646 aa9.25□□□□□ -0.93
CSDE1-213ENST00000530784 EP400Q96L91 3159 aa9.25□□□□□ -0.93
CSDE1-213ENST00000530784 TRPM3Q9HCF6 1732 aaPredicted RBP9.25□□□□□ -0.93
CSDE1-213ENST00000530784 ERVK-21P61565 698 aa9.24□□□□□ -0.93
CSDE1-213ENST00000530784 DGCR2P98153 550 aa9.24□□□□□ -0.93
CSDE1-213ENST00000530784 SRSF2Q01130 221 aaKnown RBP9.24□□□□□ -0.93
CSDE1-213ENST00000530784 MRPL49Q13405 166 aaKnown RBP9.24□□□□□ -0.93
CSDE1-213ENST00000530784 KRT27Q7Z3Y8 459 aa9.24□□□□□ -0.93
CSDE1-213ENST00000530784 MDGA1Q8NFP4 955 aa9.24□□□□□ -0.93
CSDE1-213ENST00000530784 IL17RAQ96F46 866 aa9.24□□□□□ -0.93
CSDE1-213ENST00000530784 EPC1Q9H2F5 836 aa9.24□□□□□ -0.93
CSDE1-213ENST00000530784 ATP8A1Q9Y2Q0 1164 aa9.24□□□□□ -0.93
CSDE1-213ENST00000530784 ALS2Q96Q42 1657 aa9.23□□□□□ -0.93
CSDE1-213ENST00000530784 NRAPQ86VF7 1730 aa9.23□□□□□ -0.93
CSDE1-213ENST00000530784 COL14A1Q05707 1796 aaKnown RBP9.23□□□□□ -0.93
CSDE1-213ENST00000530784 C1SP09871 688 aa9.23□□□□□ -0.93
CSDE1-213ENST00000530784 C6P13671 934 aa9.23□□□□□ -0.93
CSDE1-213ENST00000530784 CANXP27824 592 aaKnown RBP9.23□□□□□ -0.93
CSDE1-213ENST00000530784 RABGGTBP53611 331 aa9.23□□□□□ -0.93
CSDE1-213ENST00000530784 MUM1Q2TAK8 710 aa9.23□□□□□ -0.93
CSDE1-213ENST00000530784 MIIPQ5JXC2 388 aa9.23□□□□□ -0.93
CSDE1-213ENST00000530784 TMPRSS6Q8IU80 811 aa9.23□□□□□ -0.93
CSDE1-213ENST00000530784 Q8N1X5 172 aa9.23□□□□□ -0.93
CSDE1-213ENST00000530784 LILRA3Q8N6C8 439 aaPredicted RBP9.23□□□□□ -0.93
CSDE1-213ENST00000530784 GLB1L3Q8NCI6 653 aaPredicted RBP9.23□□□□□ -0.93
CSDE1-213ENST00000530784 NGDNQ8NEJ9 315 aaKnown RBP9.23□□□□□ -0.93
CSDE1-213ENST00000530784 ATXN2LQ8WWM7 1075 aaKnown RBP9.23□□□□□ -0.93
CSDE1-213ENST00000530784 ST8SIA2Q92186 375 aa9.23□□□□□ -0.93
CSDE1-213ENST00000530784 GPR87Q9BY21 358 aa9.23□□□□□ -0.93
CSDE1-213ENST00000530784 IFT122Q9HBG6 1241 aa9.23□□□□□ -0.93
CSDE1-213ENST00000530784 AURKAIP1Q9NWT8 199 aaPredicted RBP9.23□□□□□ -0.93
CSDE1-213ENST00000530784 SLC5A4Q9NY91 659 aa9.23□□□□□ -0.93
CSDE1-213ENST00000530784 ATP7BP35670 1465 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 BRWD3Q6RI45 1802 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 IPO13O94829 963 aaKnown RBP9.22□□□□□ -0.93
CSDE1-213ENST00000530784 GYPEP15421 78 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 GNAT2P19087 354 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 TACR2P21452 398 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 MAN2A2P49641 1150 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 GZMKP49863 264 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 CNGB1Q14028 1251 aaPredicted RBP9.22□□□□□ -0.93
CSDE1-213ENST00000530784 C1QL3Q5VWW1 255 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 APBB1IPQ7Z5R6 666 aaPredicted RBP9.22□□□□□ -0.93
CSDE1-213ENST00000530784 DEFB132Q7Z7B7 95 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 PGBD4Q96DM1 585 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 PLEKHG4BQ96PX9 1271 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 ZNF341Q9BYN7 854 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 CCM2LQ9NUG4 571 aaPredicted RBP9.22□□□□□ -0.93
CSDE1-213ENST00000530784 DNAJC28Q9NX36 388 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 CEP72Q9P209 647 aa9.22□□□□□ -0.93
CSDE1-213ENST00000530784 K7ESF4 209 aa9.21□□□□□ -0.94
CSDE1-213ENST00000530784 MTHFD2P13995 350 aa9.21□□□□□ -0.94
CSDE1-213ENST00000530784 BTNL9Q6UXG8 535 aa9.21□□□□□ -0.94
CSDE1-213ENST00000530784 PAWRQ96IZ0 340 aaKnown RBP9.21□□□□□ -0.94
CSDE1-213ENST00000530784 MNTQ99583 582 aa9.21□□□□□ -0.94
CSDE1-213ENST00000530784 CPPED1Q9BRF8 314 aaPredicted RBP9.21□□□□□ -0.94
CSDE1-213ENST00000530784 TRIM8Q9BZR9 551 aa9.21□□□□□ -0.94
CSDE1-213ENST00000530784 CSRNP2Q9H175 543 aa9.21□□□□□ -0.94
CSDE1-213ENST00000530784 ZNF703Q9H7S9 590 aaPredicted RBP9.21□□□□□ -0.94
CSDE1-213ENST00000530784 ITSN1Q15811 1721 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms