RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 CDH7Q9ULB5 785 aa22.8■■□□□ 1.24
TSPAN4-219ENST00000530404 CDY1Q9Y6F8 540 aa22.8■■□□□ 1.24
TSPAN4-219ENST00000530404 CDC25AP30304 524 aa22.79■■□□□ 1.24
TSPAN4-219ENST00000530404 TRAPPC10P48553 1259 aa22.79■■□□□ 1.24
TSPAN4-219ENST00000530404 TAS1R3Q7RTX0 852 aa22.79■■□□□ 1.24
TSPAN4-219ENST00000530404 FGF13Q92913 245 aa22.79■■□□□ 1.24
TSPAN4-219ENST00000530404 DDX27Q96GQ7 796 aaKnown RBP22.79■■□□□ 1.24
TSPAN4-219ENST00000530404 ACO2Q99798 780 aaKnown RBP22.79■■□□□ 1.24
TSPAN4-219ENST00000530404 FOXQ1Q9C009 403 aa22.79■■□□□ 1.24
TSPAN4-219ENST00000530404 CDT1Q9H211 546 aa22.79■■□□□ 1.24
TSPAN4-219ENST00000530404 MTRRQ9UBK8 725 aa22.79■■□□□ 1.24
TSPAN4-219ENST00000530404 TNFSF13BQ9Y275 285 aa22.79■■□□□ 1.24
TSPAN4-219ENST00000530404 PHLPP2Q6ZVD8 1323 aa22.79■■□□□ 1.24
TSPAN4-219ENST00000530404 TMEM189-UBE2V1I3L0A0 370 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 EIF5BO60841 1220 aaKnown RBP22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 HIP1RO75146 1068 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 NPTX2P47972 431 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 GPC5P78333 572 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 RAB33AQ14088 237 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 IL17AQ16552 155 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 UPP1Q16831 310 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 ZNF568Q3ZCX4 644 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 PDXDC1Q6P996 788 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 DCLRE1AQ6PJP8 1040 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 DAW1Q8N136 415 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 ADSSL1Q8N142 457 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 IGSF22Q8N9C0 903 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 ING5Q8WYH8 240 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 RUSC1Q9BVN2 902 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 DNMT3BQ9UBC3 853 aaKnown RBP22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 TICRRQ7Z2Z1 1910 aa22.78■■□□□ 1.24
TSPAN4-219ENST00000530404 GVINP1Q7Z2Y8 2422 aa22.77■■□□□ 1.24
TSPAN4-219ENST00000530404 SMIM28A0A1B0GU29 152 aa22.77■■□□□ 1.24
TSPAN4-219ENST00000530404 XYLBO75191 536 aa22.77■■□□□ 1.24
TSPAN4-219ENST00000530404 LRRN2O75325 713 aa22.77■■□□□ 1.24
TSPAN4-219ENST00000530404 HOXA9P31269 272 aa22.77■■□□□ 1.24
TSPAN4-219ENST00000530404 KCNK18Q7Z418 384 aa22.77■■□□□ 1.24
TSPAN4-219ENST00000530404 ZSCAN31Q96LW9 406 aaPredicted RBP22.77■■□□□ 1.24
TSPAN4-219ENST00000530404 KIF2CQ99661 725 aa22.77■■□□□ 1.24
TSPAN4-219ENST00000530404 TARS2Q9BW92 718 aaKnown RBP22.77■■□□□ 1.24
TSPAN4-219ENST00000530404 SLC2A4RGQ9NR83 387 aa22.77■■□□□ 1.24
TSPAN4-219ENST00000530404 ZFP37Q9Y6Q3 630 aaPredicted RBP22.77■■□□□ 1.24
TSPAN4-219ENST00000530404 HARSP12081 509 aaKnown RBP22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 U2AF2P26368 475 aaKnown RBP eCLIP22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 GRM5P41594 1212 aa22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 PDIA5Q14554 519 aa22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 PHLDB3Q6NSJ2 640 aa22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 UROC1Q96N76 676 aa22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 ZMAT2Q96NC0 199 aaKnown RBP22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 KXD1Q9BQD3 176 aa22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 CCDC94Q9BW85 323 aaPredicted RBP22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 KMT5AQ9NQR1 393 aa22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 SH2B1Q9NRF2 756 aaPredicted RBP22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 DNM3Q9UQ16 869 aa22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 SIT1Q9Y3P8 196 aa22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 R4GN57 208 aa22.76■■□□□ 1.23
TSPAN4-219ENST00000530404 TCHHQ07283 1943 aa22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 SFI1A8K8P3 1242 aa22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 GLULP15104 373 aa22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 YARSP54577 528 aaKnown RBP22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 MAPK7Q13164 816 aa22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 DMP1Q13316 513 aaPredicted RBP22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 SNW1Q13573 536 aaKnown RBP22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 ZRSR1Q15695 479 aaKnown RBP22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 PABPC1LQ4VXU2 614 aaKnown RBP22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 RINT1Q6NUQ1 792 aa22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 ALKAL1Q6UXT8 129 aa22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 APBB1IPQ7Z5R6 666 aaPredicted RBP22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 ZBTB45Q96K62 511 aaPredicted RBP22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 MMTAG2Q9BU76 263 aaKnown RBP22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 MRPL4Q9BYD3 311 aaKnown RBP22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 TMEM134Q9H6X4 195 aa22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 PTPRHQ9HD43 1115 aa22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 DLGAP2Q9P1A6 1054 aa22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 ARHGAP28Q9P2N2 729 aa22.75■■□□□ 1.23
TSPAN4-219ENST00000530404 EP300Q09472 2414 aaPredicted RBP22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 PODXLO00592 558 aa22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 SLC16A4O15374 487 aa22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 ARPP19P56211 112 aa22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 RAD51AP2Q09MP3 1159 aa22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 KRT79Q5XKE5 535 aa22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 MTSS1LQ765P7 747 aa22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 NPAS3Q8IXF0 933 aa22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 TMEM130Q8N3G9 435 aa22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 PJA1Q8NG27 643 aa22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 C18orf25Q96B23 403 aaPredicted RBP22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 SNX27Q96L92 541 aa22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 RAB34Q9BZG1 259 aa22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 BACE2Q9Y5Z0 518 aa22.74■■□□□ 1.23
TSPAN4-219ENST00000530404 MEFVO15553 781 aaPredicted RBP22.73■■□□□ 1.23
TSPAN4-219ENST00000530404 ROR1Q01973 937 aa22.73■■□□□ 1.23
TSPAN4-219ENST00000530404 SLC5A9Q2M3M2 681 aa22.73■■□□□ 1.23
TSPAN4-219ENST00000530404 UVSSAQ2YD98 709 aa22.73■■□□□ 1.23
TSPAN4-219ENST00000530404 SEZ6Q53EL9 994 aa22.73■■□□□ 1.23
TSPAN4-219ENST00000530404 XKR4Q5GH76 650 aa22.73■■□□□ 1.23
TSPAN4-219ENST00000530404 VARS2Q5ST30 1063 aaKnown RBP22.73■■□□□ 1.23
TSPAN4-219ENST00000530404 POTEHQ6S545 545 aa22.73■■□□□ 1.23
TSPAN4-219ENST00000530404 ANKS3Q6ZW76 656 aa22.73■■□□□ 1.23
TSPAN4-219ENST00000530404 C1orf186Q6ZWK4 172 aa22.73■■□□□ 1.23
TSPAN4-219ENST00000530404 KCNG4Q8TDN1 519 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms