RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 GCNT4Q9P109 453 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 CACNG4Q9UBN1 327 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 TUBGCP4Q9UGJ1 667 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 PLAGL2Q9UPG8 496 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 SCN1AP35498 2009 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 TTC26A0AVF1 554 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 UPP2O95045 317 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 TPM3P06753 285 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 TMEM191BP0C7N4 346 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 ACTN1P12814 892 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 SCNN1GP51170 649 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 GOLGA8FQ08AF8 430 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 GOLGA8DPQ0D2H9 430 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 LRMPQ12912 555 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 TMEM132DQ14C87 1099 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 TDRD10Q5VZ19 366 aaKnown RBP11.53□□□□□ -0.56
SOX6-213ENST00000530378 FAM117BQ6P1L5 589 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.53□□□□□ -0.56
SOX6-213ENST00000530378 AGMOQ6ZNB7 445 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 TMEM199Q8N511 208 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 HELQQ8TDG4 1101 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 TMC2Q8TDI7 906 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 TAS1R2Q8TE23 839 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 HTATIP2Q9BUP3 242 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 LSM14BQ9BX40 385 aaKnown RBP11.53□□□□□ -0.56
SOX6-213ENST00000530378 TSPYL2Q9H2G4 693 aaPredicted RBP11.53□□□□□ -0.56
SOX6-213ENST00000530378 GOLGA2P5Q9HBQ8 144 aa11.53□□□□□ -0.56
SOX6-213ENST00000530378 FAM207AQ9NSI2 230 aaPredicted RBP11.53□□□□□ -0.56
SOX6-213ENST00000530378 A0A0U1RQF3 1178 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.52□□□□□ -0.57
SOX6-213ENST00000530378 LRRC10BA6NIK2 292 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 C9IYK1 514 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 ENPP3O14638 875 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 IL18RAPO95256 599 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 SLC9A1P19634 815 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 PIK3CAP42336 1068 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 RAB27AP51159 221 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 CNKSR3Q6P9H4 555 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 SLC24A5Q71RS6 500 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 OTOP2Q7RTS6 562 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 USP37Q86T82 979 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 ANP32BQ92688 251 aaKnown RBP11.52□□□□□ -0.57
SOX6-213ENST00000530378 RABGGTAQ92696 567 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 PI4K2AQ9BTU6 479 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 FTHL17Q9BXU8 183 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 RSAD1Q9HA92 442 aa11.52□□□□□ -0.57
SOX6-213ENST00000530378 ARL5CA6NH57 179 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 ZBBXA8MT70 800 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 PTGESO14684 152 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 EPHB6O15197 1021 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 PHACTR2O75167 634 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 POMCP01189 267 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 KRT19P08727 400 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 EPHB4P54760 987 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 KYAT1Q16773 422 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 CLLU1OSQ5K130 101 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 GJB7Q6PEY0 223 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 SV2AQ7L0J3 742 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 WDR49Q8IV35 697 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 VSTM4Q8IW00 320 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 HACE1Q8IYU2 909 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 CPLX3Q8WVH0 158 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 SEMA4DQ92854 862 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 APBB2Q92870 758 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 MRFAP1L1Q96HT8 127 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 RPS6KC1Q96S38 1066 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 INTS2Q9H0H0 1204 aaKnown RBP11.51□□□□□ -0.57
SOX6-213ENST00000530378 TMEM8AQ9HCN3 771 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 MIOSQ9NXC5 875 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 LRFN2Q9ULH4 789 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 LAMA3Q16787 3333 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 FNDC1Q4ZHG4 1894 aaPredicted RBP11.51□□□□□ -0.57
SOX6-213ENST00000530378 SMIM28A0A1B0GU29 152 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 PPEF2O14830 753 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 VNN1O95497 513 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 HLA-DRAP01903 254 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 TNNC2P02585 160 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 ITGB3P05106 788 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 RFC2P35250 354 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 DEFB103AP81534 67 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 FPGSQ05932 587 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 SOX4Q06945 474 aaPredicted RBP11.51□□□□□ -0.57
SOX6-213ENST00000530378 KCNMA1Q12791 1236 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 IKBKEQ14164 716 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 EXOC3L4Q17RC7 722 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 PAN2Q504Q3 1202 aaKnown RBP11.51□□□□□ -0.57
SOX6-213ENST00000530378 KRT39Q6A163 491 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 SPOPLQ6IQ16 392 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 ZNF598Q86UK7 904 aaKnown RBP11.51□□□□□ -0.57
SOX6-213ENST00000530378 ANKRD36BP1Q96IX9 119 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 CNTN3Q9P232 1028 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 HCSTQ9UBK5 93 aa11.51□□□□□ -0.57
SOX6-213ENST00000530378 CASTOR2A6NHX0 329 aa11.5□□□□□ -0.57
SOX6-213ENST00000530378 STX10O60499 249 aa11.5□□□□□ -0.57
SOX6-213ENST00000530378 PARNO95453 639 aaKnown RBP11.5□□□□□ -0.57
SOX6-213ENST00000530378 C4BPAP04003 597 aaKnown RBP11.5□□□□□ -0.57
SOX6-213ENST00000530378 POLR2BP30876 1174 aaKnown RBP11.5□□□□□ -0.57
SOX6-213ENST00000530378 HSP90AA2PQ14568 343 aaPredicted RBP11.5□□□□□ -0.57
SOX6-213ENST00000530378 DUOXA2Q1HG44 320 aa11.5□□□□□ -0.57
SOX6-213ENST00000530378 GBP6Q6ZN66 633 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms