RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 LIMS2Q7Z4I7 341 aa7.54□□□□□ -1.2
CASP4-208ENST00000530309 FAM83AQ86UY5 434 aa7.54□□□□□ -1.2
CASP4-208ENST00000530309 XYLT1Q86Y38 959 aa7.54□□□□□ -1.2
CASP4-208ENST00000530309 FUKQ8N0W3 1084 aa7.54□□□□□ -1.2
CASP4-208ENST00000530309 FAM156AQ8NDB6 213 aa7.54□□□□□ -1.2
CASP4-208ENST00000530309 MYOCQ99972 504 aa7.54□□□□□ -1.2
CASP4-208ENST00000530309 WDCPQ9H6R7 721 aa7.54□□□□□ -1.2
CASP4-208ENST00000530309 ARMT1Q9H993 441 aa7.54□□□□□ -1.2
CASP4-208ENST00000530309 HECAQ9UBI9 543 aaPredicted RBP7.54□□□□□ -1.2
CASP4-208ENST00000530309 HDAC5Q9UQL6 1122 aa7.54□□□□□ -1.2
CASP4-208ENST00000530309 ADAMTS20P59510 1910 aa7.54□□□□□ -1.2
CASP4-208ENST00000530309 MAP4K4O95819 1239 aaPredicted RBP7.53□□□□□ -1.2
CASP4-208ENST00000530309 CD1AP06126 327 aa7.53□□□□□ -1.2
CASP4-208ENST00000530309 ELAVL1Q15717 326 aaKnown RBP7.53□□□□□ -1.2
CASP4-208ENST00000530309 COBLL1Q53SF7 1204 aa7.53□□□□□ -1.2
CASP4-208ENST00000530309 DARS2Q6PI48 645 aaKnown RBP7.53□□□□□ -1.2
CASP4-208ENST00000530309 SH2D3CQ8N5H7 860 aa7.53□□□□□ -1.2
CASP4-208ENST00000530309 PJA1Q8NG27 643 aa7.53□□□□□ -1.2
CASP4-208ENST00000530309 ST8SIA2Q92186 375 aa7.53□□□□□ -1.2
CASP4-208ENST00000530309 CPPED1Q9BRF8 314 aaPredicted RBP7.53□□□□□ -1.2
CASP4-208ENST00000530309 LSM14BQ9BX40 385 aaKnown RBP7.53□□□□□ -1.2
CASP4-208ENST00000530309 SLC52A1Q9NWF4 448 aa7.53□□□□□ -1.2
CASP4-208ENST00000530309 FEZ2Q9UHY8 353 aaPredicted RBP7.53□□□□□ -1.2
CASP4-208ENST00000530309 F2RL2O00254 374 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 GRM6O15303 877 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 PLIN1O60240 522 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 MFAP3LO75121 409 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 IPO13O94829 963 aaKnown RBP7.52□□□□□ -1.21
CASP4-208ENST00000530309 MTHFD1P11586 935 aaKnown RBP7.52□□□□□ -1.21
CASP4-208ENST00000530309 CACNB3P54284 484 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 FAM193AP78312 1265 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 JAG1P78504 1218 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 FGL2Q14314 439 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 KIAA0753Q2KHM9 967 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 PABPC1LQ4VXU2 614 aaKnown RBP7.52□□□□□ -1.21
CASP4-208ENST00000530309 MAEAQ7L5Y9 396 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 GPRIN1Q7Z2K8 1008 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 POLNQ7Z5Q5 900 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 KRTAP1-3Q8IUG1 177 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 ELOA2Q8IYF1 753 aaPredicted RBP7.52□□□□□ -1.21
CASP4-208ENST00000530309 D2HGDHQ8N465 521 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 IL17RDQ8NFM7 739 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 SSBP3Q9BWW4 388 aaPredicted RBP7.52□□□□□ -1.21
CASP4-208ENST00000530309 SIDT1Q9NXL6 827 aaKnown RBP7.52□□□□□ -1.21
CASP4-208ENST00000530309 PNPLA7Q6ZV29 1317 aa7.52□□□□□ -1.21
CASP4-208ENST00000530309 PRR5-ARHGAP8B1AHC4 643 aa7.51□□□□□ -1.21
CASP4-208ENST00000530309 PHKG2P15735 406 aa7.51□□□□□ -1.21
CASP4-208ENST00000530309 PRDX5P30044 214 aa7.51□□□□□ -1.21
CASP4-208ENST00000530309 CNN3Q15417 329 aaKnown RBP7.51□□□□□ -1.21
CASP4-208ENST00000530309 SAFBQ15424 915 aaKnown RBP eCLIP7.51□□□□□ -1.21
CASP4-208ENST00000530309 LCE3BQ5TA77 95 aa7.51□□□□□ -1.21
CASP4-208ENST00000530309 ZNF529Q6P280 563 aa7.51□□□□□ -1.21
CASP4-208ENST00000530309 FAM90A1Q86YD7 464 aa7.51□□□□□ -1.21
CASP4-208ENST00000530309 MDGA1Q8NFP4 955 aa7.51□□□□□ -1.21
CASP4-208ENST00000530309 ZFP28Q8NHY6 868 aa7.51□□□□□ -1.21
CASP4-208ENST00000530309 NDC1Q9BTX1 674 aa7.51□□□□□ -1.21
CASP4-208ENST00000530309 GNL3LQ9NVN8 582 aaKnown RBP7.51□□□□□ -1.21
CASP4-208ENST00000530309 FAM30AQ9NZY2 134 aa7.51□□□□□ -1.21
CASP4-208ENST00000530309 CLCA2Q9UQC9 943 aa7.51□□□□□ -1.21
CASP4-208ENST00000530309 FAM50BQ9Y247 325 aa7.51□□□□□ -1.21
CASP4-208ENST00000530309 TCRBV7S2A1N4TA0A589 114 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 PATE3B3GLJ2 98 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 GOLIM4O00461 696 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 KIAA0391O15091 583 aaKnown RBP7.5□□□□□ -1.21
CASP4-208ENST00000530309 SBK3P0C264 359 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 RAP2BP61225 183 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 HHEXQ03014 270 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 METTL24Q5JXM2 366 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 RNF220Q5VTB9 566 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 SWSAP1Q6NVH7 229 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 ANKRD35Q8N283 1001 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 NLGN4YQ8NFZ3 816 aaPredicted RBP7.5□□□□□ -1.21
CASP4-208ENST00000530309 OR52N2Q8NGI0 321 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 FBXO41Q8TF61 875 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 TFAP2CQ92754 450 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 NT5C1BQ96P26 610 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 RBM15Q96T37 977 aaKnown RBP eCLIP7.5□□□□□ -1.21
CASP4-208ENST00000530309 BHMT2Q9H2M3 363 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 MRPL46Q9H2W6 279 aaKnown RBP7.5□□□□□ -1.21
CASP4-208ENST00000530309 RTEL1Q9NZ71 1219 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 PCDHA1Q9Y5I3 950 aa7.5□□□□□ -1.21
CASP4-208ENST00000530309 ANO9A1A5B4 782 aa7.49□□□□□ -1.21
CASP4-208ENST00000530309 CFAP69A5D8W1 941 aa7.49□□□□□ -1.21
CASP4-208ENST00000530309 APAF1O14727 1248 aa7.49□□□□□ -1.21
CASP4-208ENST00000530309 POMCP01189 267 aa7.49□□□□□ -1.21
CASP4-208ENST00000530309 AMHP03971 560 aa7.49□□□□□ -1.21
CASP4-208ENST00000530309 ITGB3P05106 788 aa7.49□□□□□ -1.21
CASP4-208ENST00000530309 NBPF7P0C2Y1 421 aaPredicted RBP7.49□□□□□ -1.21
CASP4-208ENST00000530309 ALAS1P13196 640 aa7.49□□□□□ -1.21
CASP4-208ENST00000530309 UBXN2BQ14CS0 331 aa7.49□□□□□ -1.21
CASP4-208ENST00000530309 ATXN7L2Q5T6C5 722 aaPredicted RBP7.49□□□□□ -1.21
CASP4-208ENST00000530309 EFCAB12Q6NXP0 572 aa7.49□□□□□ -1.21
CASP4-208ENST00000530309 DRICH1Q6PGQ1 229 aaPredicted RBP7.49□□□□□ -1.21
CASP4-208ENST00000530309 UBE3BQ7Z3V4 1068 aa7.49□□□□□ -1.21
CASP4-208ENST00000530309 PPP1R3BQ86XI6 285 aa7.49□□□□□ -1.21
CASP4-208ENST00000530309 MIEF2Q96C03 454 aa7.49□□□□□ -1.21
CASP4-208ENST00000530309 CPEB1Q9BZB8 566 aaKnown RBP7.49□□□□□ -1.21
CASP4-208ENST00000530309 ZMAT3Q9HA38 289 aaKnown RBP7.49□□□□□ -1.21
CASP4-208ENST00000530309 SPON1Q9HCB6 807 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms