RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 NKX2-4Q9H2Z4 354 aa18.94■□□□□ 0.62
CLP1-204ENST00000529773 SLC38A7Q9NVC3 462 aa18.94■□□□□ 0.62
CLP1-204ENST00000529773 ANO10Q9NW15 660 aa18.94■□□□□ 0.62
CLP1-204ENST00000529773 TRIP11Q15643 1979 aa18.93■□□□□ 0.62
CLP1-204ENST00000529773 DDHD2O94830 711 aa18.93■□□□□ 0.62
CLP1-204ENST00000529773 CYP3A5P20815 502 aa18.93■□□□□ 0.62
CLP1-204ENST00000529773 CASP4P49662 377 aa18.93■□□□□ 0.62
CLP1-204ENST00000529773 TYRO3Q06418 890 aa18.93■□□□□ 0.62
CLP1-204ENST00000529773 ADAM9Q13443 819 aa18.93■□□□□ 0.62
CLP1-204ENST00000529773 GLRA4Q5JXX5 417 aa18.93■□□□□ 0.62
CLP1-204ENST00000529773 BORCS6Q96GS4 357 aa18.93■□□□□ 0.62
CLP1-204ENST00000529773 PLVAPQ9BX97 442 aa18.93■□□□□ 0.62
CLP1-204ENST00000529773 CHD7Q9P2D1 2997 aa18.93■□□□□ 0.62
CLP1-204ENST00000529773 CETN3O15182 167 aa18.92■□□□□ 0.62
CLP1-204ENST00000529773 NFICP08651 508 aa18.92■□□□□ 0.62
CLP1-204ENST00000529773 SOX4Q06945 474 aaPredicted RBP18.92■□□□□ 0.62
CLP1-204ENST00000529773 ZSCAN23Q3MJ62 389 aa18.92■□□□□ 0.62
CLP1-204ENST00000529773 PPP2R2DQ66LE6 453 aa18.92■□□□□ 0.62
CLP1-204ENST00000529773 EFCAB13Q8IY85 973 aa18.92■□□□□ 0.62
CLP1-204ENST00000529773 COLGALT1Q8NBJ5 622 aa18.92■□□□□ 0.62
CLP1-204ENST00000529773 UROC1Q96N76 676 aa18.92■□□□□ 0.62
CLP1-204ENST00000529773 TGS1Q96RS0 853 aaKnown RBP18.92■□□□□ 0.62
CLP1-204ENST00000529773 SLC28A3Q9HAS3 691 aa18.92■□□□□ 0.62
CLP1-204ENST00000529773 UBQLN1Q9UMX0 589 aaKnown RBP18.92■□□□□ 0.62
CLP1-204ENST00000529773 FRMD4BQ9Y2L6 1034 aa18.92■□□□□ 0.62
CLP1-204ENST00000529773 XPOTO43592 962 aaKnown RBP18.91■□□□□ 0.62
CLP1-204ENST00000529773 EFEMP2O95967 443 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 RB1P06400 928 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 GALTP07902 379 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 LRPAP1P30533 357 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 PSMC2P35998 433 aaKnown RBP18.91■□□□□ 0.62
CLP1-204ENST00000529773 BMPR1AP36894 532 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 RNASELQ05823 741 aaKnown RBP18.91■□□□□ 0.62
CLP1-204ENST00000529773 TMEM132DQ14C87 1099 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 SPATA1Q5VX52 437 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 JADE1Q6IE81 842 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 INTS8Q75QN2 995 aaKnown RBP18.91■□□□□ 0.62
CLP1-204ENST00000529773 WDR49Q8IV35 697 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 PLEKHO2Q8TD55 490 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 TMC2Q8TDI7 906 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 KIF12Q96FN5 646 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 CGRRF1Q99675 332 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 PDE11AQ9HCR9 933 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 AAASQ9NRG9 546 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 DNAJB4Q9UDY4 337 aa18.91■□□□□ 0.62
CLP1-204ENST00000529773 TMEM189-UBE2V1I3L0A0 370 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 ZC3H11AO75152 810 aaKnown RBP eCLIP18.9■□□□□ 0.62
CLP1-204ENST00000529773 PPM1AP35813 382 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 SLC11A1P49279 550 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 MARSP56192 900 aaKnown RBP18.9■□□□□ 0.62
CLP1-204ENST00000529773 BCAR1P56945 870 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 STX17P56962 302 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 EPC2Q52LR7 807 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 CEP135Q66GS9 1140 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 KCNT2Q6UVM3 1135 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 C11orf57Q6ZUT1 292 aaPredicted RBP18.9■□□□□ 0.62
CLP1-204ENST00000529773 SPRED2Q7Z698 418 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 FILIP1Q7Z7B0 1213 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 FAM186BQ8IYM0 893 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 SLC39A11Q8N1S5 342 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 CSGALNACT2Q8N6G5 542 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 PARD3BQ8TEW8 1205 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 ZNF558Q96NG5 402 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 FAM193BQ96PV7 902 aaPredicted RBP18.9■□□□□ 0.62
CLP1-204ENST00000529773 C17orf80Q9BSJ5 609 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 MARCH5Q9NX47 278 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 TUBGCP4Q9UGJ1 667 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 PTPRJQ12913 1337 aa18.9■□□□□ 0.62
CLP1-204ENST00000529773 COL4A4P53420 1690 aaPredicted RBP18.89■□□□□ 0.61
CLP1-204ENST00000529773 SYCE3A1L190 88 aa18.89■□□□□ 0.61
CLP1-204ENST00000529773 CCDC192P0DO97 292 aa18.89■□□□□ 0.61
CLP1-204ENST00000529773 EPB41P11171 864 aaKnown RBP18.89■□□□□ 0.61
CLP1-204ENST00000529773 RPL9P32969 192 aaKnown RBP18.89■□□□□ 0.61
CLP1-204ENST00000529773 PLCB3Q01970 1234 aa18.89■□□□□ 0.61
CLP1-204ENST00000529773 UPP1Q16831 310 aa18.89■□□□□ 0.61
CLP1-204ENST00000529773 RDH13Q8NBN7 331 aa18.89■□□□□ 0.61
CLP1-204ENST00000529773 CXorf38Q8TB03 319 aa18.89■□□□□ 0.61
CLP1-204ENST00000529773 ENOX1Q8TC92 643 aaKnown RBP18.89■□□□□ 0.61
CLP1-204ENST00000529773 C18orf25Q96B23 403 aaPredicted RBP18.89■□□□□ 0.61
CLP1-204ENST00000529773 DDX27Q96GQ7 796 aaKnown RBP18.89■□□□□ 0.61
CLP1-204ENST00000529773 LRCH3Q96II8 777 aa18.89■□□□□ 0.61
CLP1-204ENST00000529773 BPIFA3Q9BQP9 254 aa18.89■□□□□ 0.61
CLP1-204ENST00000529773 INTS13Q9NVM9 706 aa18.89■□□□□ 0.61
CLP1-204ENST00000529773 ANO9A1A5B4 782 aa18.88■□□□□ 0.61
CLP1-204ENST00000529773 NRP1O14786 923 aa18.88■□□□□ 0.61
CLP1-204ENST00000529773 FGFR1OPO95684 399 aaKnown RBP18.88■□□□□ 0.61
CLP1-204ENST00000529773 CTNNB1P35222 781 aa18.88■□□□□ 0.61
CLP1-204ENST00000529773 ALDH7A1P49419 539 aaKnown RBP18.88■□□□□ 0.61
CLP1-204ENST00000529773 SPAG1Q07617 926 aa18.88■□□□□ 0.61
CLP1-204ENST00000529773 BFSP1Q12934 665 aa18.88■□□□□ 0.61
CLP1-204ENST00000529773 C1orf220Q5T0J3 134 aa18.88■□□□□ 0.61
CLP1-204ENST00000529773 FRMD5Q7Z6J6 570 aa18.88■□□□□ 0.61
CLP1-204ENST00000529773 USP37Q86T82 979 aa18.88■□□□□ 0.61
CLP1-204ENST00000529773 TMEM173Q86WV6 379 aaPredicted RBP18.88■□□□□ 0.61
CLP1-204ENST00000529773 RNF168Q8IYW5 571 aaPredicted RBP18.88■□□□□ 0.61
CLP1-204ENST00000529773 BEST2Q8NFU1 509 aa18.88■□□□□ 0.61
CLP1-204ENST00000529773 NOC3LQ8WTT2 800 aaKnown RBP18.88■□□□□ 0.61
CLP1-204ENST00000529773 PAAF1Q9BRP4 392 aa18.88■□□□□ 0.61
CLP1-204ENST00000529773 C11orf84Q9BUA3 381 aaPredicted RBP18.88■□□□□ 0.61
CLP1-204ENST00000529773 TTYH1Q9H313 450 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms