RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 FBXL16Q8N461 479 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 DAGLBQ8NCG7 672 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 GSTCDQ8NEC7 633 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 ITFG1Q8TB96 612 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 LNX1Q8TBB1 728 aaPredicted RBP9.97□□□□□ -0.81
VPS11-203ENST00000529545 SLC7A14Q8TBB6 771 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 WNT2BQ93097 391 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 CLDN23Q96B33 292 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 CLSTN3Q9BQT9 956 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 NCOA5Q9HCD5 579 aaKnown RBP9.97□□□□□ -0.81
VPS11-203ENST00000529545 KCNMB3Q9NPA1 279 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 RGL1Q9NZL6 768 aa9.97□□□□□ -0.81
VPS11-203ENST00000529545 WRAP73Q9P2S5 460 aaPredicted RBP9.97□□□□□ -0.81
VPS11-203ENST00000529545 MRPS23Q9Y3D9 190 aaKnown RBP9.97□□□□□ -0.81
VPS11-203ENST00000529545 ARID2Q68CP9 1835 aa9.96□□□□□ -0.81
VPS11-203ENST00000529545 KMT2BQ9UMN6 2715 aaPredicted RBP9.96□□□□□ -0.81
VPS11-203ENST00000529545 DOCK6Q96HP0 2047 aa9.96□□□□□ -0.81
VPS11-203ENST00000529545 CASTOR2A6NHX0 329 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 MAN2B1O00754 1011 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 TBX3O15119 743 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 CCNT1O60563 726 aaKnown RBP9.96□□□□□ -0.82
VPS11-203ENST00000529545 CDC45O75419 566 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 ECI2O75521 394 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 DGAT1O75907 488 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 THP07101 528 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 TARSP26639 723 aaKnown RBP9.96□□□□□ -0.82
VPS11-203ENST00000529545 PDIA3P30101 505 aaKnown RBP9.96□□□□□ -0.82
VPS11-203ENST00000529545 CYP4A11Q02928 519 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 CTTNQ14247 550 aaKnown RBP9.96□□□□□ -0.82
VPS11-203ENST00000529545 TMEM132AQ24JP5 1023 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 LAIR1Q6GTX8 287 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 TSSK4Q6SA08 328 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 THSD4Q6ZMP0 1018 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 NPAS3Q8IXF0 933 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 SLFN12Q8IYM2 578 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 KCNV2Q8TDN2 545 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 HASPINQ8TF76 798 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 NELL1Q92832 810 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 DYDC2Q96IM9 177 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 NFKBIZQ9BYH8 718 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 AGXT2Q9BYV1 514 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 GDE1Q9NZC3 331 aa9.96□□□□□ -0.82
VPS11-203ENST00000529545 TPRP12270 2363 aaKnown RBP9.96□□□□□ -0.82
VPS11-203ENST00000529545 ACACBO00763 2458 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 A0A1B0GUA9 196 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 M0R2N6 131 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 ZBTB39O15060 712 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 KIF4AO95239 1232 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 ADRB1P08588 477 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 XBP1P17861 261 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 OR1D2P34982 312 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 SPEM2Q0P670 501 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 MTAPQ13126 283 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 CAPSQ13938 189 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 RAB33AQ14088 237 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 AMHR2Q16671 573 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 TSR1Q2NL82 804 aaKnown RBP9.95□□□□□ -0.82
VPS11-203ENST00000529545 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.95□□□□□ -0.82
VPS11-203ENST00000529545 CDR2LQ86X02 465 aaPredicted RBP9.95□□□□□ -0.82
VPS11-203ENST00000529545 CELF5Q8N6W0 485 aaKnown RBP9.95□□□□□ -0.82
VPS11-203ENST00000529545 NETO1Q8TDF5 533 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 ASAP3Q8TDY4 903 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 ING5Q8WYH8 240 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 DNASE1L2Q92874 299 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 MCRS1Q96EZ8 462 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 PAAF1Q9BRP4 392 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 IER2Q9BTL4 223 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 BRD9Q9H8M2 597 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 XPNPEP1Q9NQW7 623 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 PRMT8Q9NR22 394 aaPredicted RBP9.95□□□□□ -0.82
VPS11-203ENST00000529545 HEBP1Q9NRV9 189 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 ANKEF1Q9NU02 776 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 HCFC1R1Q9NWW0 138 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 KIAA1468Q9P260 1216 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 DNMT3BQ9UBC3 853 aaKnown RBP9.95□□□□□ -0.82
VPS11-203ENST00000529545 NDRG2Q9UN36 371 aaKnown RBP9.95□□□□□ -0.82
VPS11-203ENST00000529545 SNX14Q9Y5W7 946 aa9.95□□□□□ -0.82
VPS11-203ENST00000529545 GPR179Q6PRD1 2367 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 COL4A3Q01955 1670 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 LRRIQ4A6NIV6 560 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 N4BP3O15049 544 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 B4GALT5O43286 388 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 TRAPPC3O43617 180 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 LRP3O75074 770 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 LRG1P02750 347 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 PTPN2P17706 415 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 GLRA2P23416 452 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 ELF1P32519 619 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 HSPA4P34932 840 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 ARL2P36404 184 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 EVCP57679 992 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 IRX6P78412 446 aaPredicted RBP9.94□□□□□ -0.82
VPS11-203ENST00000529545 PPM1JQ5JR12 505 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 PRR23BQ6ZRT6 265 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 ZBTB8OSQ8IWT0 167 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 ANKK1Q8NFD2 765 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 KCNB2Q92953 911 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 IRF7Q92985 503 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 ELSPBP1Q96BH3 223 aa9.94□□□□□ -0.82
VPS11-203ENST00000529545 PRIMPOLQ96LW4 560 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms