RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 PAK1Q13153 545 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 ADGRE1Q14246 886 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 MYBPC2Q14324 1141 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 CCDC85BQ15834 202 aaPredicted RBP15.22■□□□□ 0.03
USF1-209ENST00000529476 SNRNP35Q16560 246 aaKnown RBP15.22■□□□□ 0.03
USF1-209ENST00000529476 NFIL3Q16649 462 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 EDRF1Q3B7T1 1238 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 SPOUT1Q5T280 376 aaKnown RBP15.22■□□□□ 0.03
USF1-209ENST00000529476 SASS6Q6UVJ0 657 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 BRSK2Q8IWQ3 736 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 TMEM174Q8WUU8 243 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 EEF2KMTQ96G04 330 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 PPP1R10Q96QC0 940 aaKnown RBP15.22■□□□□ 0.03
USF1-209ENST00000529476 GAS2L1Q99501 681 aaPredicted RBP15.22■□□□□ 0.03
USF1-209ENST00000529476 TSG101Q99816 390 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 C17orf80Q9BSJ5 609 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 PRDM12Q9H4Q4 367 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 KIAA1586Q9HCI6 787 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 DNAJB4Q9UDY4 337 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 MTUS1Q9ULD2 1270 aa15.22■□□□□ 0.03
USF1-209ENST00000529476 ZC3H11AO75152 810 aaKnown RBP eCLIP15.21■□□□□ 0.03
USF1-209ENST00000529476 RPL13P26373 211 aaKnown RBP15.21■□□□□ 0.03
USF1-209ENST00000529476 PBX3P40426 434 aa15.21■□□□□ 0.03
USF1-209ENST00000529476 POU5F1Q01860 360 aaKnown RBP15.21■□□□□ 0.03
USF1-209ENST00000529476 LRRC63Q05C16 580 aa15.21■□□□□ 0.03
USF1-209ENST00000529476 DSC1Q08554 894 aa15.21■□□□□ 0.03
USF1-209ENST00000529476 ADAM9Q13443 819 aa15.21■□□□□ 0.03
USF1-209ENST00000529476 NAB2Q15742 525 aa15.21■□□□□ 0.03
USF1-209ENST00000529476 CEP135Q66GS9 1140 aa15.21■□□□□ 0.03
USF1-209ENST00000529476 JADE1Q6IE81 842 aa15.21■□□□□ 0.03
USF1-209ENST00000529476 TTI2Q6NXR4 508 aa15.21■□□□□ 0.03
USF1-209ENST00000529476 CLP1Q92989 425 aaKnown RBP15.21■□□□□ 0.03
USF1-209ENST00000529476 C18orf25Q96B23 403 aaPredicted RBP15.21■□□□□ 0.03
USF1-209ENST00000529476 KIF12Q96FN5 646 aa15.21■□□□□ 0.03
USF1-209ENST00000529476 FAM193BQ96PV7 902 aaPredicted RBP15.21■□□□□ 0.03
USF1-209ENST00000529476 TGS1Q96RS0 853 aaKnown RBP15.21■□□□□ 0.03
USF1-209ENST00000529476 DUSP9Q99956 384 aaKnown RBP15.21■□□□□ 0.03
USF1-209ENST00000529476 CERS4Q9HA82 394 aa15.21■□□□□ 0.03
USF1-209ENST00000529476 PDE11AQ9HCR9 933 aa15.21■□□□□ 0.03
USF1-209ENST00000529476 CACNG4Q9UBN1 327 aa15.21■□□□□ 0.03
USF1-209ENST00000529476 BICDL2A1A5D9 508 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 AKAP3O75969 853 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 IL18RAPO95256 599 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 NFICP08651 508 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 LAG3P18627 525 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 BCAR1P56945 870 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 ERVK-21P61565 698 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 SOX4Q06945 474 aaPredicted RBP15.2■□□□□ 0.02
USF1-209ENST00000529476 CYP24A1Q07973 514 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 CD302Q8IX05 232 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 COLGALT2Q8IYK4 626 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 TMEM130Q8N3G9 435 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 COLGALT1Q8NBJ5 622 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 RABGGTAQ92696 567 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 MED15Q96RN5 788 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 C1QTNF1Q9BXJ1 281 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 ASB7Q9H672 318 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 GOLGA2P5Q9HBQ8 144 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 RWDD2AQ9UIY3 292 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 FRMD4BQ9Y2L6 1034 aa15.2■□□□□ 0.02
USF1-209ENST00000529476 TCF20Q9UGU0 1960 aaKnown RBP15.2■□□□□ 0.02
USF1-209ENST00000529476 SYCE3A1L190 88 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 CASTOR2A6NHX0 329 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 NT5C1B-RDH14C9J2C7 533 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 CETN3O15182 167 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 GALTP07902 379 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 CTNNB1P35222 781 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 BMPR1AP36894 532 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 SLC11A1P49279 550 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 GUCY2FP51841 1108 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 FKBP3Q00688 224 aaKnown RBP15.19■□□□□ 0.02
USF1-209ENST00000529476 TYRO3Q06418 890 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 TUSC3Q13454 348 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 HSP90AA2PQ14568 343 aaPredicted RBP15.19■□□□□ 0.02
USF1-209ENST00000529476 TMEM132DQ14C87 1099 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 ZBTB6Q15916 424 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 STX1AQ16623 288 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 EPC2Q52LR7 807 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 KCNT2Q6UVM3 1135 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 ZC3H3Q8IXZ2 948 aaKnown RBP15.19■□□□□ 0.02
USF1-209ENST00000529476 EFCAB13Q8IY85 973 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 PLEKHO2Q8TD55 490 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 CCDC127Q96BQ5 260 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 FAM84AQ96KN4 292 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 MFSD14AQ96MC6 490 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 ZNF558Q96NG5 402 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 PAAF1Q9BRP4 392 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 TMEM175Q9BSA9 504 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 AAASQ9NRG9 546 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 SLC38A7Q9NVC3 462 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 ANO10Q9NW15 660 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 TUBGCP4Q9UGJ1 667 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 DACH1Q9UI36 760 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 MYO9BQ13459 2157 aa15.19■□□□□ 0.02
USF1-209ENST00000529476 PLXNA4Q9HCM2 1894 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 F8W810 466 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 NRP1O14786 923 aa15.18■□□□□ 0.02
USF1-209ENST00000529476 LETM1O95202 739 aaPredicted RBP15.18■□□□□ 0.02
USF1-209ENST00000529476 PSMC2P35998 433 aaKnown RBP15.18■□□□□ 0.02
USF1-209ENST00000529476 OR1G1P47890 313 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms