RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 RGMAQ96B86 450 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 PGBD4Q96DM1 585 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 SGCZQ96LD1 299 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 WDR92Q96MX6 357 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 ADOQ96SZ5 270 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 CDK5RAP1Q96SZ6 601 aaKnown RBP4.01□□□□□ -1.77
BRCA2-203ENST00000528762 APOL5Q9BWW9 433 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 HAPLN2Q9GZV7 340 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 ARMT1Q9H993 441 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 GNL3LQ9NVN8 582 aaKnown RBP4.01□□□□□ -1.77
BRCA2-203ENST00000528762 POLR3BQ9NW08 1133 aaPredicted RBP4.01□□□□□ -1.77
BRCA2-203ENST00000528762 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.01□□□□□ -1.77
BRCA2-203ENST00000528762 Q9UFV3 132 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 DNAI1Q9UI46 699 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 FBXO10Q9UK96 956 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 RASA4BC9J798 803 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 NPIPB8E9PQR5 432 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 H0Y858 1186 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 H3BUI4 141 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 OVOL3O00110 214 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 RASA4O43374 803 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 SGTAO43765 313 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 PIP5K1CO60331 668 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 FZD7O75084 574 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 ENDOD1O94919 500 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 ARIH2O95376 493 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 RPL17P18621 184 aaKnown RBP4□□□□□ -1.77
BRCA2-203ENST00000528762 ACVRL1P37023 503 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 ADCY8P40145 1251 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 PIK3CBP42338 1070 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 NKX6-1P78426 367 aaPredicted RBP4□□□□□ -1.77
BRCA2-203ENST00000528762 DGCR2P98153 550 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 BTKQ06187 659 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 RAPGEF1Q13905 1077 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 TUBB8Q3ZCM7 444 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 NRN1LQ496H8 165 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 TMEM200BQ69YZ2 307 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 RSPH3Q86UC2 560 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 BCL6BQ8N143 479 aaPredicted RBP4□□□□□ -1.77
BRCA2-203ENST00000528762 NKAPQ8N5F7 415 aaKnown RBP4□□□□□ -1.77
BRCA2-203ENST00000528762 VPS37AQ8NEZ2 397 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 PLBD2Q8NHP8 589 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 NSUN6Q8TEA1 469 aaKnown RBP4□□□□□ -1.77
BRCA2-203ENST00000528762 SNX33Q8WV41 574 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 PHKBQ93100 1093 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 CYFIP2Q96F07 1278 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 APIPQ96GX9 242 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 FAM167AQ96KS9 214 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 UIMC1Q96RL1 719 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 DMRTA2Q96SC8 542 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 DPYSL5Q9BPU6 564 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 MANSC1Q9H8J5 431 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 KIAA1586Q9HCI6 787 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 TDP1Q9NUW8 608 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 PNPOQ9NVS9 261 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 CDC42EP3Q9UKI2 254 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 ZFR2Q9UPR6 939 aaKnown RBP4□□□□□ -1.77
BRCA2-203ENST00000528762 PCDHA3Q9Y5H8 950 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 SLC4A7Q9Y6M7 1214 aa4□□□□□ -1.77
BRCA2-203ENST00000528762 RHPN2P1A8MT19 583 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 GAAP10253 952 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 HNRNPLP14866 589 aaKnown RBP eCLIP3.99□□□□□ -1.77
BRCA2-203ENST00000528762 SMARCA1P28370 1054 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 ECHS1P30084 290 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 SESN2P58004 480 aaPredicted RBP3.99□□□□□ -1.77
BRCA2-203ENST00000528762 CDC42EP1Q00587 391 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 STK3Q13188 491 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 NOGQ13253 232 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 USP10Q14694 798 aaKnown RBP3.99□□□□□ -1.77
BRCA2-203ENST00000528762 POLD3Q15054 466 aaPredicted RBP3.99□□□□□ -1.77
BRCA2-203ENST00000528762 EIF4HQ15056 248 aaKnown RBP3.99□□□□□ -1.77
BRCA2-203ENST00000528762 RALBP1Q15311 655 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 RNF151Q2KHN1 245 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 CRB2Q5IJ48 1285 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 Q6ZVL8 140 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 HEATR3Q7Z4Q2 680 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 MYLK4Q86YV6 388 aaPredicted RBP3.99□□□□□ -1.77
BRCA2-203ENST00000528762 FAM9AQ8IZU1 332 aaPredicted RBP3.99□□□□□ -1.77
BRCA2-203ENST00000528762 FUKQ8N0W3 1084 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 CCHCR1Q8TD31 782 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 PNISRQ8TF01 805 aaKnown RBP3.99□□□□□ -1.77
BRCA2-203ENST00000528762 PPM1EQ8WY54 764 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 HOXB13Q92826 284 aaPredicted RBP3.99□□□□□ -1.77
BRCA2-203ENST00000528762 GFM2Q969S9 779 aaKnown RBP3.99□□□□□ -1.77
BRCA2-203ENST00000528762 NEIL1Q96FI4 390 aaPredicted RBP3.99□□□□□ -1.77
BRCA2-203ENST00000528762 AJUBAQ96IF1 538 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 RIPOR3Q96MK2 946 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 VRK1Q99986 396 aaPredicted RBP3.99□□□□□ -1.77
BRCA2-203ENST00000528762 HERPUD2Q9BSE4 406 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 SELENOOQ9BVL4 669 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 LRRC27Q9C0I9 530 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 KIAA1683Q9H0B3 1180 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 ATP6V0A4Q9HBG4 840 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 LMBRD1Q9NUN5 540 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 TRMT13Q9NUP7 481 aaKnown RBP3.99□□□□□ -1.77
BRCA2-203ENST00000528762 CALCOCO1Q9P1Z2 691 aa3.99□□□□□ -1.77
BRCA2-203ENST00000528762 KAT6BQ8WYB5 2073 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 A0A1W2PPL8 197 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 LRRC14BA6NHZ5 514 aa3.98□□□□□ -1.77
BRCA2-203ENST00000528762 F5H423 210 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms