RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 CDR2LQ86X02 465 aaPredicted RBP18.58■□□□□ 0.56
PCDHA6-202ENST00000527624 GSPT2Q8IYD1 628 aaKnown RBP18.58■□□□□ 0.56
PCDHA6-202ENST00000527624 FAM212AQ96EL1 285 aa18.58■□□□□ 0.56
PCDHA6-202ENST00000527624 PARK7Q99497 189 aaKnown RBP18.58■□□□□ 0.56
PCDHA6-202ENST00000527624 INO80BQ9C086 356 aaPredicted RBP18.58■□□□□ 0.56
PCDHA6-202ENST00000527624 HPCAL4Q9UM19 191 aa18.58■□□□□ 0.56
PCDHA6-202ENST00000527624 STXBP5LQ9Y2K9 1186 aa18.58■□□□□ 0.56
PCDHA6-202ENST00000527624 CEP104O60308 925 aa18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 FAM189A1O60320 539 aa18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 RTN2O75298 545 aa18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 C22orf31O95567 290 aa18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 ABRAQ8N0Z2 381 aa18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 JPH2Q9BR39 696 aaPredicted RBP18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 KATNBL1Q9H079 304 aa18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 CTTNBP2NLQ9P2B4 639 aa18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 DMGDHQ9UI17 866 aaKnown RBP18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 PLXNB2O15031 1838 aa18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 CDR2Q01850 454 aa18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 TMEM132AQ24JP5 1023 aa18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 SELENOOQ9BVL4 669 aa18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 C2orf40Q9H1Z8 148 aa18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 APOBEC3GQ9HC16 384 aaKnown RBP18.57■□□□□ 0.56
PCDHA6-202ENST00000527624 PCNTO95613 3336 aa18.56■□□□□ 0.56
PCDHA6-202ENST00000527624 PHACTR2O75167 634 aa18.56■□□□□ 0.56
PCDHA6-202ENST00000527624 TFDP1Q14186 410 aa18.56■□□□□ 0.56
PCDHA6-202ENST00000527624 ENOSF1Q7L5Y1 443 aa18.56■□□□□ 0.56
PCDHA6-202ENST00000527624 BRSK2Q8IWQ3 736 aa18.56■□□□□ 0.56
PCDHA6-202ENST00000527624 PPTC7Q8NI37 304 aa18.56■□□□□ 0.56
PCDHA6-202ENST00000527624 DDX1Q92499 740 aaKnown RBP18.56■□□□□ 0.56
PCDHA6-202ENST00000527624 MINDY3Q9H8M7 445 aa18.56■□□□□ 0.56
PCDHA6-202ENST00000527624 AMFRQ9UKV5 643 aa18.56■□□□□ 0.56
PCDHA6-202ENST00000527624 ABLIM1O14639 778 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 CSDE1O75534 798 aaKnown RBP18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 ZBTB48P10074 688 aaPredicted RBP18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 OSTNP61366 133 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 GPC5P78333 572 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 GRB14Q14449 540 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 AENQ8WTP8 325 aaKnown RBP18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 MAML3Q96JK9 1138 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 GDAP1L1Q96MZ0 367 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 PLEKHA4Q9H4M7 779 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 UMODL1Q5DID0 1318 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 SYF2O95926 243 aaKnown RBP18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 GZMAP12544 262 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 LMAN1P49257 510 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 C8orf74Q6P047 294 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 PLEKHH3Q7Z736 793 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 ZNF467Q7Z7K2 595 aaPredicted RBP18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 RHOT2Q8IXI1 618 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 THNSL1Q8IYQ7 743 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 USP38Q8NB14 1042 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 HES6Q96HZ4 224 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 PBKQ96KB5 322 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 PLXNA1Q9UIW2 1896 aa18.55■□□□□ 0.56
PCDHA6-202ENST00000527624 RBM47A0AV96 593 aaKnown RBP18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 TMEM110-MUSTN1A8MSY1 372 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 OGTO15294 1046 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 IQCF3P0C7M6 154 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 MBTD1Q05BQ5 628 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 MCL1Q07820 350 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 NCOA4Q13772 614 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 FAM110CQ1W6H9 321 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 ZNF568Q3ZCX4 644 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 ATF7IP2Q5U623 682 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 CST9Q5W186 159 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 MTMR12Q9C0I1 747 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 CPA4Q9UI42 421 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 NUB1Q9Y5A7 615 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 ACKR2O00590 384 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 CES2O00748 559 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 SMPD1P17405 629 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 PTENP60484 403 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 NOP14P78316 857 aaKnown RBP18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 CUL2Q13617 745 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 ZNF484Q5JVG2 852 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 EEF1DP3Q658K8 133 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 MPZL3Q6UWV2 235 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 TSHZ1Q6ZSZ6 1077 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 CEP120Q8N960 986 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 NPLOC4Q8TAT6 608 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 KRT12Q99456 494 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 C16orf70Q9BSU1 422 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 FZD8Q9H461 694 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 CALCOCO1Q9P1Z2 691 aa18.54■□□□□ 0.56
PCDHA6-202ENST00000527624 ZNF653Q96CK0 615 aa18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 AP1M1Q9BXS5 423 aa18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 STIM2Q9P246 746 aa18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 NOC2LQ9Y3T9 749 aaKnown RBP18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 A0A0U1RQG5 324 aaPredicted RBP18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 CLTAP09496 248 aa18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 ACO1P21399 889 aaKnown RBP18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 HNRNPH2P55795 449 aaKnown RBP18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 HUNKP57058 714 aa18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 GLE1Q53GS7 698 aaKnown RBP18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 WDR49Q8IV35 697 aa18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 KLHL7Q8IXQ5 586 aa18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 EMID1Q96A84 441 aaPredicted RBP18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 FAM81BQ96LP2 452 aa18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 TINF2Q9BSI4 451 aa18.53■□□□□ 0.56
PCDHA6-202ENST00000527624 IFT122Q9HBG6 1241 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms