RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 IGFBP6P24592 240 aaPredicted RBP17.74■□□□□ 0.43
PTPRU-210ENST00000527027 RPA1P27694 616 aa17.74■□□□□ 0.43
PTPRU-210ENST00000527027 MCM7P33993 719 aa17.74■□□□□ 0.43
PTPRU-210ENST00000527027 MAGEA9P43362 315 aa17.74■□□□□ 0.43
PTPRU-210ENST00000527027 PPP2R5AQ15172 486 aa17.74■□□□□ 0.43
PTPRU-210ENST00000527027 DCAF4L1Q3SXM0 396 aa17.74■□□□□ 0.43
PTPRU-210ENST00000527027 PPP1R10Q96QC0 940 aaKnown RBP17.74■□□□□ 0.43
PTPRU-210ENST00000527027 NELL2Q99435 816 aa17.74■□□□□ 0.43
PTPRU-210ENST00000527027 LTB4R2Q9NPC1 389 aa17.74■□□□□ 0.43
PTPRU-210ENST00000527027 MRPS23Q9Y3D9 190 aaKnown RBP17.74■□□□□ 0.43
PTPRU-210ENST00000527027 DNAH14Q0VDD8 3507 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 ARHGEF35A5YM69 484 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 JAK2O60674 1132 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 CD72P21854 359 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 CLCNKBP51801 687 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 EFNA5P52803 228 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 FOSBP53539 338 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 CSTF1Q05048 431 aaKnown RBP17.73■□□□□ 0.43
PTPRU-210ENST00000527027 GLRA4Q5JXX5 417 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 ZBTB41Q5SVQ8 909 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 NT5DC1Q5TFE4 455 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 CD300LGQ6UXG3 332 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 ANKS3Q6ZW76 656 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 ERMNQ8TAM6 284 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 ING5Q8WYH8 240 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 MCRS1Q96EZ8 462 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 UROC1Q96N76 676 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 DLL3Q9NYJ7 618 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 GDE1Q9NZC3 331 aa17.73■□□□□ 0.43
PTPRU-210ENST00000527027 NCOR2Q9Y618 2525 aa17.72■□□□□ 0.43
PTPRU-210ENST00000527027 SPTLC1O15269 473 aa17.72■□□□□ 0.43
PTPRU-210ENST00000527027 NCAM2O15394 837 aa17.72■□□□□ 0.43
PTPRU-210ENST00000527027 ECI2O75521 394 aa17.72■□□□□ 0.43
PTPRU-210ENST00000527027 LARGE1O95461 756 aa17.72■□□□□ 0.43
PTPRU-210ENST00000527027 TKTP29401 623 aaKnown RBP17.72■□□□□ 0.43
PTPRU-210ENST00000527027 UPP1Q16831 310 aa17.72■□□□□ 0.43
PTPRU-210ENST00000527027 ATF7IP2Q5U623 682 aa17.72■□□□□ 0.43
PTPRU-210ENST00000527027 ATRIPQ8WXE1 791 aa17.72■□□□□ 0.43
PTPRU-210ENST00000527027 CLDN23Q96B33 292 aa17.72■□□□□ 0.43
PTPRU-210ENST00000527027 IFT74Q96LB3 600 aa17.72■□□□□ 0.43
PTPRU-210ENST00000527027 AVENQ9NQS1 362 aaPredicted RBP17.72■□□□□ 0.43
PTPRU-210ENST00000527027 PCDHGA2Q9Y5H1 932 aa17.72■□□□□ 0.43
PTPRU-210ENST00000527027 RHOP08100 348 aa17.71■□□□□ 0.43
PTPRU-210ENST00000527027 PTPN2P17706 415 aa17.71■□□□□ 0.43
PTPRU-210ENST00000527027 MUTP22033 750 aa17.71■□□□□ 0.43
PTPRU-210ENST00000527027 VARS2Q5ST30 1063 aaKnown RBP17.71■□□□□ 0.43
PTPRU-210ENST00000527027 TPRG1Q6ZUI0 275 aa17.71■□□□□ 0.43
PTPRU-210ENST00000527027 APBB1IPQ7Z5R6 666 aaPredicted RBP17.71■□□□□ 0.43
PTPRU-210ENST00000527027 ZNF461Q8TAF7 563 aa17.71■□□□□ 0.43
PTPRU-210ENST00000527027 DDX27Q96GQ7 796 aaKnown RBP17.71■□□□□ 0.43
PTPRU-210ENST00000527027 KIFC3Q9BVG8 833 aa17.71■□□□□ 0.43
PTPRU-210ENST00000527027 PLA2G2FQ9BZM2 168 aa17.71■□□□□ 0.43
PTPRU-210ENST00000527027 POLD4Q9HCU8 107 aa17.71■□□□□ 0.43
PTPRU-210ENST00000527027 SMIM28A0A1B0GU29 152 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 ARHGEF37A1IGU5 675 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 K7ERI5 159 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 OR52Z1P0C646 297 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 TARSP26639 723 aaKnown RBP17.7■□□□□ 0.42
PTPRU-210ENST00000527027 ELF1P32519 619 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 BRCC3P46736 316 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 RPS9P46781 194 aaKnown RBP17.7■□□□□ 0.42
PTPRU-210ENST00000527027 SAFBQ15424 915 aaKnown RBP eCLIP17.7■□□□□ 0.42
PTPRU-210ENST00000527027 SLC5A9Q2M3M2 681 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 SLC8B1Q6J4K2 584 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 ZNF852Q6ZMS4 543 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 ZBTB44Q8NCP5 570 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 C3orf58Q8NDZ4 430 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 KIFAP3Q92845 792 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 GOLGA2P5Q9HBQ8 144 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 ZSCAN32Q9NX65 697 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 NCDNQ9UBB6 729 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 TNFSF13BQ9Y275 285 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 MRPS17Q9Y2R5 130 aaKnown RBP17.7■□□□□ 0.42
PTPRU-210ENST00000527027 FANCMQ8IYD8 2048 aa17.7■□□□□ 0.42
PTPRU-210ENST00000527027 MYH15Q9Y2K3 1946 aa17.69■□□□□ 0.42
PTPRU-210ENST00000527027 I3L4J1 428 aa17.69■□□□□ 0.42
PTPRU-210ENST00000527027 ABLIM3O94929 683 aa17.69■□□□□ 0.42
PTPRU-210ENST00000527027 LRG1P02750 347 aa17.69■□□□□ 0.42
PTPRU-210ENST00000527027 YARSP54577 528 aaKnown RBP17.69■□□□□ 0.42
PTPRU-210ENST00000527027 ORC2Q13416 577 aaPredicted RBP17.69■□□□□ 0.42
PTPRU-210ENST00000527027 ZNF174Q15697 407 aa17.69■□□□□ 0.42
PTPRU-210ENST00000527027 RSPO4Q2I0M5 234 aaPredicted RBP17.69■□□□□ 0.42
PTPRU-210ENST00000527027 XKR4Q5GH76 650 aa17.69■□□□□ 0.42
PTPRU-210ENST00000527027 TANGO2Q6ICL3 276 aa17.69■□□□□ 0.42
PTPRU-210ENST00000527027 POTEHQ6S545 545 aa17.69■□□□□ 0.42
PTPRU-210ENST00000527027 ALKAL1Q6UXT8 129 aa17.69■□□□□ 0.42
PTPRU-210ENST00000527027 GPR161Q8N6U8 529 aaKnown RBP17.69■□□□□ 0.42
PTPRU-210ENST00000527027 NELL1Q92832 810 aa17.69■□□□□ 0.42
PTPRU-210ENST00000527027 ELSPBP1Q96BH3 223 aa17.69■□□□□ 0.42
PTPRU-210ENST00000527027 HEBP1Q9NRV9 189 aa17.69■□□□□ 0.42
PTPRU-210ENST00000527027 TOPORSQ9NS56 1045 aaPredicted RBP17.69■□□□□ 0.42
PTPRU-210ENST00000527027 PRRG1O14668 218 aa17.68■□□□□ 0.42
PTPRU-210ENST00000527027 ATF2P15336 505 aa17.68■□□□□ 0.42
PTPRU-210ENST00000527027 CEBPBP17676 345 aa17.68■□□□□ 0.42
PTPRU-210ENST00000527027 GRM5P41594 1212 aa17.68■□□□□ 0.42
PTPRU-210ENST00000527027 ROR1Q01973 937 aa17.68■□□□□ 0.42
PTPRU-210ENST00000527027 GUCY1B3Q02153 619 aa17.68■□□□□ 0.42
PTPRU-210ENST00000527027 SOX4Q06945 474 aaPredicted RBP17.68■□□□□ 0.42
PTPRU-210ENST00000527027 ADCY1Q08828 1119 aa17.68■□□□□ 0.42
PTPRU-210ENST00000527027 FZD5Q13467 585 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms