RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 DDX27Q96GQ7 796 aaKnown RBP20.63■□□□□ 0.89
CAPN1-206ENST00000526966 UROC1Q96N76 676 aa20.63■□□□□ 0.89
CAPN1-206ENST00000526966 HCFC1R1Q9NWW0 138 aa20.63■□□□□ 0.89
CAPN1-206ENST00000526966 DNMT3BQ9UBC3 853 aaKnown RBP20.63■□□□□ 0.89
CAPN1-206ENST00000526966 POLIQ9UNA4 740 aa20.63■□□□□ 0.89
CAPN1-206ENST00000526966 BACE2Q9Y5Z0 518 aa20.63■□□□□ 0.89
CAPN1-206ENST00000526966 KANSL1LA0AUZ9 987 aa20.62■□□□□ 0.89
CAPN1-206ENST00000526966 B3GAT3O94766 335 aa20.62■□□□□ 0.89
CAPN1-206ENST00000526966 NEK4P51957 841 aa20.62■□□□□ 0.89
CAPN1-206ENST00000526966 GUCY1B3Q02153 619 aa20.62■□□□□ 0.89
CAPN1-206ENST00000526966 SNW1Q13573 536 aaKnown RBP20.62■□□□□ 0.89
CAPN1-206ENST00000526966 MLF2Q15773 248 aaPredicted RBP20.62■□□□□ 0.89
CAPN1-206ENST00000526966 ECM1Q16610 540 aa20.62■□□□□ 0.89
CAPN1-206ENST00000526966 UPP1Q16831 310 aa20.62■□□□□ 0.89
CAPN1-206ENST00000526966 PABPC1LQ4VXU2 614 aaKnown RBP20.62■□□□□ 0.89
CAPN1-206ENST00000526966 ATF7IP2Q5U623 682 aa20.62■□□□□ 0.89
CAPN1-206ENST00000526966 C3orf58Q8NDZ4 430 aa20.62■□□□□ 0.89
CAPN1-206ENST00000526966 KIFAP3Q92845 792 aa20.62■□□□□ 0.89
CAPN1-206ENST00000526966 IFT74Q96LB3 600 aa20.62■□□□□ 0.89
CAPN1-206ENST00000526966 OSBPL6Q9BZF3 934 aa20.62■□□□□ 0.89
CAPN1-206ENST00000526966 CDY1Q9Y6F8 540 aa20.62■□□□□ 0.89
CAPN1-206ENST00000526966 F5P12259 2224 aa20.61■□□□□ 0.89
CAPN1-206ENST00000526966 TKTP29401 623 aaKnown RBP20.61■□□□□ 0.89
CAPN1-206ENST00000526966 ZNF174Q15697 407 aa20.61■□□□□ 0.89
CAPN1-206ENST00000526966 ANKS3Q6ZW76 656 aa20.61■□□□□ 0.89
CAPN1-206ENST00000526966 FOXP1Q9H334 677 aaPredicted RBP20.61■□□□□ 0.89
CAPN1-206ENST00000526966 GOLGA2P5Q9HBQ8 144 aa20.61■□□□□ 0.89
CAPN1-206ENST00000526966 TNFSF13BQ9Y275 285 aa20.61■□□□□ 0.89
CAPN1-206ENST00000526966 GTF3C3Q9Y5Q9 886 aa20.61■□□□□ 0.89
CAPN1-206ENST00000526966 FXR2P51116 673 aaKnown RBP eCLIP20.6■□□□□ 0.89
CAPN1-206ENST00000526966 PFKPQ01813 784 aa20.6■□□□□ 0.89
CAPN1-206ENST00000526966 ZNF528Q3MIS6 628 aa20.6■□□□□ 0.89
CAPN1-206ENST00000526966 SLC44A4Q53GD3 710 aa20.6■□□□□ 0.89
CAPN1-206ENST00000526966 XKR4Q5GH76 650 aa20.6■□□□□ 0.89
CAPN1-206ENST00000526966 APBB1IPQ7Z5R6 666 aaPredicted RBP20.6■□□□□ 0.89
CAPN1-206ENST00000526966 CEP120Q8N960 986 aa20.6■□□□□ 0.89
CAPN1-206ENST00000526966 KXD1Q9BQD3 176 aa20.6■□□□□ 0.89
CAPN1-206ENST00000526966 BHMT2Q9H2M3 363 aa20.6■□□□□ 0.89
CAPN1-206ENST00000526966 POLD4Q9HCU8 107 aa20.6■□□□□ 0.89
CAPN1-206ENST00000526966 AVENQ9NQS1 362 aaPredicted RBP20.6■□□□□ 0.89
CAPN1-206ENST00000526966 PHLPP2Q6ZVD8 1323 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 SMIM28A0A1B0GU29 152 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 TRAPPC3O43617 180 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 CCT6AP40227 531 aaKnown RBP20.59■□□□□ 0.89
CAPN1-206ENST00000526966 GRM5P41594 1212 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 SOX4Q06945 474 aaPredicted RBP20.59■□□□□ 0.89
CAPN1-206ENST00000526966 TTC38Q5R3I4 469 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 SLC8B1Q6J4K2 584 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 ALKAL1Q6UXT8 129 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 C4orf32Q8N8J7 132 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 RMDN1Q96DB5 314 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 C8orf76Q96K31 380 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 BCO2Q9BYV7 579 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 CDT1Q9H211 546 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 PTPRHQ9HD43 1115 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 LTB4R2Q9NPC1 389 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 FBXO4Q9UKT5 387 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 MYH11P35749 1972 aa20.59■□□□□ 0.89
CAPN1-206ENST00000526966 COL4A2P08572 1712 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 ARHGEF37A1IGU5 675 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 I3L4J1 428 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 K7ERI5 159 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 ECI2O75521 394 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 RHOP08100 348 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 MAGEA9P43362 315 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 BRCC3P46736 316 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 TRAPPC10P48553 1259 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 ROR1Q01973 937 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 SLC5A9Q2M3M2 681 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 POTEHQ6S545 545 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 SUMF1Q8NBK3 374 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 ING5Q8WYH8 240 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 RUBCNQ92622 972 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 TOPORSQ9NS56 1045 aaPredicted RBP20.58■□□□□ 0.89
CAPN1-206ENST00000526966 GDE1Q9NZC3 331 aa20.58■□□□□ 0.89
CAPN1-206ENST00000526966 MRPS23Q9Y3D9 190 aaKnown RBP20.58■□□□□ 0.89
CAPN1-206ENST00000526966 MTF2Q9Y483 593 aaPredicted RBP20.58■□□□□ 0.89
CAPN1-206ENST00000526966 ABLIM3O94929 683 aa20.57■□□□□ 0.88
CAPN1-206ENST00000526966 UBXN2BQ14CS0 331 aa20.57■□□□□ 0.88
CAPN1-206ENST00000526966 ERICH6BQ5W0A0 696 aa20.57■□□□□ 0.88
CAPN1-206ENST00000526966 KIAA2013Q8IYS2 634 aa20.57■□□□□ 0.88
CAPN1-206ENST00000526966 DAW1Q8N136 415 aa20.57■□□□□ 0.88
CAPN1-206ENST00000526966 FBXO18Q8NFZ0 1043 aa20.57■□□□□ 0.88
CAPN1-206ENST00000526966 ZNF461Q8TAF7 563 aa20.57■□□□□ 0.88
CAPN1-206ENST00000526966 BORCS6Q96GS4 357 aa20.57■□□□□ 0.88
CAPN1-206ENST00000526966 ACO2Q99798 780 aaKnown RBP20.57■□□□□ 0.88
CAPN1-206ENST00000526966 LLPHQ9BRT6 129 aaKnown RBP20.57■□□□□ 0.88
CAPN1-206ENST00000526966 CCDC94Q9BW85 323 aaPredicted RBP20.57■□□□□ 0.88
CAPN1-206ENST00000526966 ARHGAP28Q9P2N2 729 aa20.57■□□□□ 0.88
CAPN1-206ENST00000526966 KIAA1024Q9UPX6 916 aa20.57■□□□□ 0.88
CAPN1-206ENST00000526966 NCOR2Q9Y618 2525 aa20.57■□□□□ 0.88
CAPN1-206ENST00000526966 WDR27A2RRH5 827 aa20.56■□□□□ 0.88
CAPN1-206ENST00000526966 FAM170BA6NMN3 283 aa20.56■□□□□ 0.88
CAPN1-206ENST00000526966 TBC1D4O60343 1298 aa20.56■□□□□ 0.88
CAPN1-206ENST00000526966 NPTX2P47972 431 aa20.56■□□□□ 0.88
CAPN1-206ENST00000526966 YARSP54577 528 aaKnown RBP20.56■□□□□ 0.88
CAPN1-206ENST00000526966 PDIA5Q14554 519 aa20.56■□□□□ 0.88
CAPN1-206ENST00000526966 ZNF568Q3ZCX4 644 aa20.56■□□□□ 0.88
CAPN1-206ENST00000526966 VARS2Q5ST30 1063 aaKnown RBP20.56■□□□□ 0.88
CAPN1-206ENST00000526966 TAS1R3Q7RTX0 852 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms