RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 DMAC2Q9NW81 257 aa13.8□□□□□ -0.2
SSSCA1-203ENST00000526877 LRRC10BA6NIK2 292 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 ANKRD63C9JTQ0 380 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 ACKR2O00590 384 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 N4BP3O15049 544 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 EOMESO95936 686 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 PRKCSHP14314 528 aaPredicted RBP13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 GTF2F1P35269 517 aaKnown RBP eCLIP13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 COPB1P53618 953 aaKnown RBP13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 MARSP56192 900 aaKnown RBP13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 MBTD1Q05BQ5 628 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 NCBP1Q09161 790 aaKnown RBP13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 CCDC173Q0VFZ6 552 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 PRPF4BQ13523 1007 aaKnown RBP13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 FAM187BQ17R55 369 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 CLLU1OSQ5K130 101 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 FRMD5Q7Z6J6 570 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 DRC7Q8IY82 874 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 COLGALT1Q8NBJ5 622 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 POF1BQ8WVV4 589 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 MRFAP1L1Q96HT8 127 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 PRIMPOLQ96LW4 560 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 TUBGCP2Q9BSJ2 902 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 TARS2Q9BW92 718 aaKnown RBP13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 XPO4Q9C0E2 1151 aaKnown RBP13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 VPS16Q9H269 839 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 PCIF1Q9H4Z3 704 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 MINDY3Q9H8M7 445 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 TAB2Q9NYJ8 693 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 HSPBP1Q9NZL4 362 aa13.79□□□□□ -0.2
SSSCA1-203ENST00000526877 A0A1B0GTH6 734 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 GRXCR2A6NFK2 248 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 H3BQ06 376 aaPredicted RBP13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 PES1O00541 588 aaKnown RBP13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 HOXA2O43364 376 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 NCK2O43639 380 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 FGF18O76093 207 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 ERLIN2O94905 339 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 LDHAP00338 332 aaKnown RBP13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 CDC25BP30305 580 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 PPP2R3AQ06190 1150 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 DLX2Q07687 328 aaPredicted RBP13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 ADAM15Q13444 863 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 PCBP1Q15365 356 aaKnown RBP eCLIP13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 MAN2A1Q16706 1144 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 ADGRD2Q7Z7M1 963 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 FAM186BQ8IYM0 893 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 NAP1L5Q96NT1 182 aaPredicted RBP13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 ACO2Q99798 780 aaKnown RBP13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 CBWD1Q9BRT8 395 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 TCHPQ9BT92 498 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 KIAA1586Q9HCI6 787 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 CD320Q9NPF0 282 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 RTN4Q9NQC3 1192 aaKnown RBP13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 AAASQ9NRG9 546 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 ARMCX3Q9UH62 379 aaPredicted RBP13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 PCDHB12Q9Y5F1 795 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 STYXL1Q9Y6J8 313 aa13.78□□□□□ -0.2
SSSCA1-203ENST00000526877 TISP43B9A030 160 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 MAPK13O15264 365 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 CLDN3O15551 220 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 ZNF623O75123 536 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 TOM1L1O75674 476 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 AKAP3O75969 853 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 KRT13P13646 458 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 IL9P15248 144 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 LAG3P18627 525 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 SFPQP23246 707 aaKnown RBP eCLIP13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 ADSSP30520 456 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 HOXA11P31270 313 aaPredicted RBP13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 DEKP35659 375 aaKnown RBP13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 CASP4P49662 377 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 ERVFC1P60507 584 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 UBE3AQ05086 875 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 NR1I3Q14994 352 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 SPOUT1Q5T280 376 aaKnown RBP13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 ATF7IP2Q5U623 682 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 PTCRAQ6ISU1 281 aaPredicted RBP13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 SLC39A4Q6P5W5 647 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 CATSPER4Q7RTX7 472 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 APTXQ7Z2E3 356 aaKnown RBP13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 GPD1LQ8N335 351 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 CLDND1Q9NY35 253 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 AGO2Q9UKV8 859 aaKnown RBP13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 PCDHGC5Q9Y5F6 944 aa13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.77□□□□□ -0.21
SSSCA1-203ENST00000526877 MEIS3P2A8K0S8 358 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 FSCN2O14926 492 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 LINC01565O15544 149 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 EXTL3O43909 919 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 CSPG5O95196 566 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 PLCB3Q01970 1234 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 VWA3BQ502W6 1294 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 UBXN11Q5T124 520 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 FKBP15Q5T1M5 1219 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 KCNT2Q6UVM3 1135 aa13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 INTS8Q75QN2 995 aaKnown RBP13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 APBB1IPQ7Z5R6 666 aaPredicted RBP13.76□□□□□ -0.21
SSSCA1-203ENST00000526877 TRIM59Q8IWR1 403 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms