RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 Q6ZSN1 163 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 GAREM2Q75VX8 874 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 MAEAQ7L5Y9 396 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 COL23A1Q86Y22 540 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-211ENST00000525970 BCL6BQ8N143 479 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-211ENST00000525970 LRTOMTQ8WZ04 291 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 TBCBQ99426 244 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 NOL10Q9BSC4 688 aaKnown RBP5.62□□□□□ -1.51
CSDE1-211ENST00000525970 NUP62CLQ9H1M0 184 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 OR10A2Q9H208 303 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 GREM2Q9H772 168 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 DMRT3Q9NQL9 472 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 STXBP5LQ9Y2K9 1186 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 VWA7Q9Y334 891 aa5.62□□□□□ -1.51
CSDE1-211ENST00000525970 CFAP20Q9Y6A4 193 aaKnown RBP5.62□□□□□ -1.51
CSDE1-211ENST00000525970 A0A088AWK7 358 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 ARHGAP6O43182 974 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 FRS3O43559 492 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 SEC24DO94855 1032 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-211ENST00000525970 RPS19P39019 145 aaKnown RBP5.61□□□□□ -1.51
CSDE1-211ENST00000525970 PIK3CBP42338 1070 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 CASP5P51878 434 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 MAP2K6P52564 334 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 SESN2P58004 480 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-211ENST00000525970 CCT2P78371 535 aaKnown RBP5.61□□□□□ -1.51
CSDE1-211ENST00000525970 MGAT2Q10469 447 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 TBR1Q16650 682 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 MUM1L1Q5H9M0 696 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 ANO1Q5XXA6 986 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 APOA5Q6Q788 366 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 MAMDC4Q6UXC1 1216 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 BMP8AQ7Z5Y6 402 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 DPP9Q86TI2 863 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 SKAP1Q86WV1 359 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 CDYL2Q8N8U2 506 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 ANKRD42Q8N9B4 389 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 OR2I1PQ8NGU4 316 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 OR14K1Q8NGZ2 314 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 PLBD2Q8NHP8 589 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 GAB3Q8WWW8 586 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 EXTL1Q92935 676 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 GFM2Q969S9 779 aaKnown RBP5.61□□□□□ -1.51
CSDE1-211ENST00000525970 SELENOOQ9BVL4 669 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 APOL5Q9BWW9 433 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 C22orf23Q9BZE7 217 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 BTBD1Q9H0C5 482 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 ATP6V0A4Q9HBG4 840 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 POLR3BQ9NW08 1133 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-211ENST00000525970 DNAI1Q9UI46 699 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 PCDHB6Q9Y5E3 794 aa5.61□□□□□ -1.51
CSDE1-211ENST00000525970 DAPK3O43293 454 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 NARSO43776 548 aaKnown RBP5.6□□□□□ -1.51
CSDE1-211ENST00000525970 CDC14BO60729 498 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 NBNO60934 754 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 MYF5P13349 255 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 PRIM2P49643 509 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 DPTQ07507 201 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 DUSP8Q13202 625 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 IFIT5Q13325 482 aaKnown RBP5.6□□□□□ -1.51
CSDE1-211ENST00000525970 IL10RAQ13651 578 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 POLD3Q15054 466 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-211ENST00000525970 LSM12Q3MHD2 195 aaKnown RBP5.6□□□□□ -1.51
CSDE1-211ENST00000525970 TUBB8Q3ZCM7 444 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 DGKKQ5KSL6 1271 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 OR2C3Q8N628 320 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 PPP1R14CQ8TAE6 165 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 KLHDC4Q8TBB5 520 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 NSUN6Q8TEA1 469 aaKnown RBP5.6□□□□□ -1.51
CSDE1-211ENST00000525970 POF1BQ8WVV4 589 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 HOXB13Q92826 284 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-211ENST00000525970 GCDHQ92947 438 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-211ENST00000525970 PHKBQ93100 1093 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 HDAC10Q969S8 669 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 CHFRQ96EP1 664 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 HIST1H2AHQ96KK5 128 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 RIPOR3Q96MK2 946 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 WDR92Q96MX6 357 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 HIST1H2AJQ99878 128 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 DPYSL5Q9BPU6 564 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 FDXACB1Q9BRP7 624 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-211ENST00000525970 WDR12Q9GZL7 423 aaKnown RBP5.6□□□□□ -1.51
CSDE1-211ENST00000525970 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.6□□□□□ -1.51
CSDE1-211ENST00000525970 USP18Q9UMW8 372 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 PCDHB1Q9Y5F3 818 aa5.6□□□□□ -1.51
CSDE1-211ENST00000525970 A0A0A6YYK5 440 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-211ENST00000525970 SLC16A6O15403 523 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 ACRV1P26436 265 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 IL6STP40189 918 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-211ENST00000525970 INHBEP58166 350 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 GPSM2P81274 684 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 BTKQ06187 659 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 SMN1Q16637 294 aaKnown RBP5.59□□□□□ -1.51
CSDE1-211ENST00000525970 GLB1L3Q8NCI6 653 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-211ENST00000525970 ACRBPQ8NEB7 543 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 DPF2Q92785 391 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 KAT5Q92993 513 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 APIPQ96GX9 242 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 DMRTA2Q96SC8 542 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 SOX7Q9BT81 388 aa5.59□□□□□ -1.51
CSDE1-211ENST00000525970 PLA2G12BQ9BX93 195 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms