RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 NELFBQ8WX92 580 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 ZNF516Q92618 1163 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 CCDC34Q96HJ3 373 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 PPP1R10Q96QC0 940 aaKnown RBP5□□□□□ -1.61
CHMP4A-202ENST00000524955 MED15Q96RN5 788 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 DUSP9Q99956 384 aaKnown RBP5□□□□□ -1.61
CHMP4A-202ENST00000524955 VN1R3Q9BXE9 311 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 IGFLR1Q9H665 355 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 UBN1Q9NPG3 1134 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 PRDM6Q9NQX0 595 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 RMND1Q9NWS8 449 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 MARCH5Q9NX47 278 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 MTMR10Q9NXD2 777 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 SPG21Q9NZD8 308 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 CNTN3Q9P232 1028 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 KCNG1Q9UIX4 513 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 FAN1Q9Y2M0 1017 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 TIMM13Q9Y5L4 95 aaPredicted RBP5□□□□□ -1.61
CHMP4A-202ENST00000524955 STYXL1Q9Y6J8 313 aa5□□□□□ -1.61
CHMP4A-202ENST00000524955 TCHHQ07283 1943 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 LOXHD1Q8IVV2 1947 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 KAT6AQ92794 2004 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 SYCE3A1L190 88 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 ZNF233A6NK53 670 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 LRRIQ3A6PVS8 624 aaPredicted RBP4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 H3BNC9 293 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 PODXLO00592 558 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 PDXKO00764 312 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 SPTLC1O15269 473 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 CALUO43852 315 aaPredicted RBP4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 LPXNO60711 386 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 TADA2AO75478 443 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 B3GAT3O94766 335 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 CLSTN1O94985 981 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 ITGB3P05106 788 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 KRT19P08727 400 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 KCNE1P15382 129 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 LAG3P18627 525 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 TNNI1P19237 187 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 NLRP12P59046 1061 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 CYP24A1Q07973 514 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 DSC1Q08554 894 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 ADAM9Q13443 819 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 TUSC3Q13454 348 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 CAMK1Q14012 370 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 HSP90AA2PQ14568 343 aaPredicted RBP4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 TMEM132DQ14C87 1099 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 SKIV2LQ15477 1246 aaKnown RBP4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 SNRNP35Q16560 246 aaKnown RBP4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 ZCWPW2Q504Y3 356 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 XKR4Q5GH76 650 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 DCAF17Q5H9S7 520 aaPredicted RBP4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 CCDC183Q5T5S1 534 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 CENPPQ6IPU0 288 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 LLGL2Q6P1M3 1020 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 PRSS55Q6UWB4 352 aaPredicted RBP4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 CD300LGQ6UXG3 332 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 TMC7Q7Z402 723 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 BRSK2Q8IWQ3 736 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 VPS52Q8N1B4 723 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 SLC39A11Q8N1S5 342 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 CSGALNACT2Q8N6G5 542 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 FEZF2Q8TBJ5 459 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 SPPL3Q8TCT6 385 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 CLP1Q92989 425 aaKnown RBP4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 P2RX5Q93086 422 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 TMEM169Q96HH4 297 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 IGSF21Q96ID5 467 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 APOL5Q9BWW9 433 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 SRRTQ9BXP5 876 aaKnown RBP4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 MRPL9Q9BYD2 267 aaKnown RBP4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 GPR62Q9BZJ7 368 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 MTMR12Q9C0I1 747 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 DNAJC25Q9H1X3 360 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 ENTPD7Q9NQZ7 604 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 DMAC2Q9NW81 257 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 DPP3Q9NY33 737 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 KANSL3Q9P2N6 904 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 AGAP1Q9UPQ3 857 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 TRAF3IP3Q9Y228 551 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 PCDHB12Q9Y5F1 795 aa4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 RANBP2P49792 3224 aaKnown RBP4.99□□□□□ -1.61
CHMP4A-202ENST00000524955 UBE4BO95155 1302 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 LAMA2P24043 3122 aaKnown RBP4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 MICAL3Q7RTP6 2002 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 HIDE1A8MVS5 230 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 PSMA7O14818 248 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 INPPL1O15357 1258 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 LINC01565O15544 149 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 ADAM12O43184 909 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 HCRTO43612 131 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 PHACTR2O75167 634 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 IL18RAPO95256 599 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 CXCL14O95715 111 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 MBD3O95983 291 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 LDHAP00338 332 aaKnown RBP4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 CST3P01034 146 aaPredicted RBP4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 TMEM191BP0C7N4 346 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 SPATA31D3P0C874 917 aa4.98□□□□□ -1.61
CHMP4A-202ENST00000524955 FOSL2P15408 326 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms