RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 MLST8Q9BVC4 326 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 MTFR1LQ9H019 292 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 WNT8AQ9H1J5 351 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 EPC1Q9H2F5 836 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 SORCS3Q9UPU3 1222 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 RGPD5Q99666 1765 aa4.04□□□□□ -1.76
CSDE1-208ENST00000524652 AHDC1Q5TGY3 1603 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-208ENST00000524652 PHRF1Q9P1Y6 1649 aaKnown RBP4.03□□□□□ -1.76
CSDE1-208ENST00000524652 EP400Q96L91 3159 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 MAP2P11137 1827 aaKnown RBP4.03□□□□□ -1.76
CSDE1-208ENST00000524652 GCP02774 474 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 LSP1P33241 339 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 ADRA1BP35368 520 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 CASRP41180 1078 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 GZMKP49863 264 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 NRG3P56975 720 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 DUSP2Q05923 314 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 FSTL1Q12841 308 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 MRPL49Q13405 166 aaKnown RBP4.03□□□□□ -1.76
CSDE1-208ENST00000524652 SART3Q15020 963 aaKnown RBP4.03□□□□□ -1.76
CSDE1-208ENST00000524652 PTPAQ15257 358 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 VPS72Q15906 364 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 MBNL2Q5VZF2 373 aaKnown RBP4.03□□□□□ -1.76
CSDE1-208ENST00000524652 KCNV1Q6PIU1 500 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 LMBR1LQ6UX01 489 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 TAS1R1Q7RTX1 841 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 CXorf67Q86X51 503 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-208ENST00000524652 GLB1L2Q8IW92 636 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 NIM1KQ8IY84 436 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 AHI1Q8N157 1196 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 CPT1CQ8TCG5 803 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 RSAD2Q8WXG1 361 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 CDK19Q9BWU1 502 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 SLC46A2Q9BY10 475 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 CPEB1Q9BZB8 566 aaKnown RBP4.03□□□□□ -1.76
CSDE1-208ENST00000524652 PACSIN3Q9UKS6 424 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 USP18Q9UMW8 372 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.03□□□□□ -1.76
CSDE1-208ENST00000524652 PLAAQ9Y263 795 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 NUMBLQ9Y6R0 609 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 LTN1O94822 1766 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 PXDNQ92626 1479 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 SHPRHQ149N8 1683 aa4.03□□□□□ -1.76
CSDE1-208ENST00000524652 MSH6P52701 1360 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 EIF3AQ14152 1382 aaKnown RBP4.02□□□□□ -1.77
CSDE1-208ENST00000524652 A0A1W2PR48 441 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 SCAF4O95104 1147 aaKnown RBP4.02□□□□□ -1.77
CSDE1-208ENST00000524652 CFBP00751 764 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 LAG3P18627 525 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 PROZP22891 400 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 LSSP48449 732 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 SCNN1BP51168 640 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 MEF2AQ02078 507 aaPredicted RBP4.02□□□□□ -1.77
CSDE1-208ENST00000524652 TERF2Q15554 542 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 TKFCQ3LXA3 575 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 TIGD2Q4W5G0 525 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 CNNM4Q6P4Q7 775 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 MSL3Q8N5Y2 521 aaKnown RBP4.02□□□□□ -1.77
CSDE1-208ENST00000524652 DDX17Q92841 729 aaKnown RBP4.02□□□□□ -1.77
CSDE1-208ENST00000524652 MYEOVQ96EZ4 313 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 FAM193BQ96PV7 902 aaPredicted RBP4.02□□□□□ -1.77
CSDE1-208ENST00000524652 DCLRE1CQ96SD1 692 aaKnown RBP4.02□□□□□ -1.77
CSDE1-208ENST00000524652 ORAI2Q96SN7 254 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 LSM14BQ9BX40 385 aaKnown RBP4.02□□□□□ -1.77
CSDE1-208ENST00000524652 KCNH6Q9H252 994 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 PIF1Q9H611 641 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.02□□□□□ -1.77
CSDE1-208ENST00000524652 POGKQ9P215 609 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 EIF2B4Q9UI10 523 aaKnown RBP4.02□□□□□ -1.77
CSDE1-208ENST00000524652 CLCA2Q9UQC9 943 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 HDAC5Q9UQL6 1122 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 PCSK5Q92824 1860 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 PPIP5K1Q6PFW1 1433 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 ANKARQ7Z5J8 1434 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 COL22A1Q8NFW1 1626 aaPredicted RBP4.02□□□□□ -1.77
CSDE1-208ENST00000524652 RGPD2P0DJD1 1756 aa4.02□□□□□ -1.77
CSDE1-208ENST00000524652 KIF7Q2M1P5 1343 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 WASHC2AQ641Q2 1341 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 GAGE12BA1L429 117 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 PRSS38A1L453 326 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 GRID2IPA4D2P6 1211 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 GAGE12HA6NDE8 117 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 B3GALT2O43825 422 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 ZEB1P37275 1124 aaPredicted RBP4.01□□□□□ -1.77
CSDE1-208ENST00000524652 MANFP55145 182 aaKnown RBP4.01□□□□□ -1.77
CSDE1-208ENST00000524652 C1QTNF8P60827 252 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 MGAT5Q09328 741 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 PCBP1Q15365 356 aaKnown RBP eCLIP4.01□□□□□ -1.77
CSDE1-208ENST00000524652 SEPT7Q16181 437 aaKnown RBP4.01□□□□□ -1.77
CSDE1-208ENST00000524652 FRMD7Q6ZUT3 714 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 BRINP3Q76B58 766 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 GPRIN1Q7Z2K8 1008 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 C11orf74Q86VG3 221 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 OR2W6PQ8NHA6 318 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 OR14C36Q8NHC7 312 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 FEZ1Q99689 392 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 NDC1Q9BTX1 674 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 TARS2Q9BW92 718 aaKnown RBP4.01□□□□□ -1.77
CSDE1-208ENST00000524652 TOR3AQ9H497 397 aa4.01□□□□□ -1.77
CSDE1-208ENST00000524652 SPTLC3Q9NUV7 552 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms