RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 FAM160A1Q05DH4 1040 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 DLX2Q07687 328 aaPredicted RBP13.03□□□□□ -0.32
CLN8-207ENST00000524258 HSP90AA2PQ14568 343 aaPredicted RBP13.03□□□□□ -0.32
CLN8-207ENST00000524258 POSTNQ15063 836 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 KYAT1Q16773 422 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 DUSP6Q16828 381 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 KIAA0319Q5VV43 1072 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 AUTS2Q8WXX7 1259 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 TCF25Q9BQ70 676 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 HERC2P3Q9BVR0 1158 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 TMEM206Q9H813 350 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 ADAM28Q9UKQ2 775 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 EXOC7Q9UPT5 735 aa13.03□□□□□ -0.32
CLN8-207ENST00000524258 TDRD15B5MCY1 1934 aaKnown RBP13.02□□□□□ -0.32
CLN8-207ENST00000524258 PER2O15055 1255 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 CSPG5O95196 566 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 CXCL14O95715 111 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 CLCNKBP51801 687 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 RBM10P98175 930 aaKnown RBP13.02□□□□□ -0.33
CLN8-207ENST00000524258 TFF2Q03403 129 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 SPAG1Q07617 926 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 PSMD2Q13200 908 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 PTPN14Q15678 1187 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 PLPP4Q5VZY2 271 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 FUT10Q6P4F1 479 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 TMC7Q7Z402 723 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 ELOA2Q8IYF1 753 aaPredicted RBP13.02□□□□□ -0.33
CLN8-207ENST00000524258 GPR65Q8IYL9 337 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 EFHBQ8N7U6 833 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 TMEM174Q8WUU8 243 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 POMGNT1Q8WZA1 660 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 PABPC5Q96DU9 382 aaKnown RBP13.02□□□□□ -0.33
CLN8-207ENST00000524258 FBXL18Q96ME1 805 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 TIGD1Q96MW7 591 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 IPO9Q96P70 1041 aaKnown RBP13.02□□□□□ -0.33
CLN8-207ENST00000524258 COLEC11Q9BWP8 271 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 KCTD10Q9H3F6 313 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 UBE2ZQ9H832 354 aaPredicted RBP13.02□□□□□ -0.33
CLN8-207ENST00000524258 RXFP1Q9HBX9 757 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 CLEC1BQ9P126 229 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 TUBGCP4Q9UGJ1 667 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 UBE4BO95155 1302 aa13.02□□□□□ -0.33
CLN8-207ENST00000524258 TBX10O75333 385 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 CYP3A5P20815 502 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 LRPAP1P30533 357 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 NRIP1P48552 1158 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 DSG1Q02413 1049 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 SMC1AQ14683 1233 aaKnown RBP13.01□□□□□ -0.33
CLN8-207ENST00000524258 KCNB1Q14721 858 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 SCARA3Q6AZY7 606 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 DCLRE1AQ6PJP8 1040 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 TMEM184AQ6ZMB5 413 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 RBM23Q86U06 439 aaKnown RBP13.01□□□□□ -0.33
CLN8-207ENST00000524258 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLN8-207ENST00000524258 C12orf56Q8IXR9 622 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 CXorf38Q8TB03 319 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 SLC22A17Q8WUG5 538 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 HLA-CQ95604 372 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 SAAL1Q96ER3 474 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 MSLNLQ96KJ4 702 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 UROC1Q96N76 676 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 TSPAN18Q96SJ8 248 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 GZF1Q9H116 711 aaPredicted RBP13.01□□□□□ -0.33
CLN8-207ENST00000524258 RPF1Q9H9Y2 349 aaKnown RBP13.01□□□□□ -0.33
CLN8-207ENST00000524258 AGPAT3Q9NRZ7 376 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 SLC38A7Q9NVC3 462 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 DMAC2Q9NW81 257 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 COG5Q9UP83 839 aa13.01□□□□□ -0.33
CLN8-207ENST00000524258 CITO14578 2027 aa13□□□□□ -0.33
CLN8-207ENST00000524258 GOLGA8IPA6NC78 632 aa13□□□□□ -0.33
CLN8-207ENST00000524258 GOLGA8JA6NMD2 632 aa13□□□□□ -0.33
CLN8-207ENST00000524258 PPEF2O14830 753 aa13□□□□□ -0.33
CLN8-207ENST00000524258 NCK2O43639 380 aa13□□□□□ -0.33
CLN8-207ENST00000524258 EXTL3O43909 919 aa13□□□□□ -0.33
CLN8-207ENST00000524258 CLASP2O75122 1294 aaKnown RBP13□□□□□ -0.33
CLN8-207ENST00000524258 NFICP08651 508 aa13□□□□□ -0.33
CLN8-207ENST00000524258 CNPP09543 421 aaKnown RBP13□□□□□ -0.33
CLN8-207ENST00000524258 RPL9P32969 192 aaKnown RBP13□□□□□ -0.33
CLN8-207ENST00000524258 MATR3P43243 847 aaKnown RBP eCLIP13□□□□□ -0.33
CLN8-207ENST00000524258 GUCY2FP51841 1108 aa13□□□□□ -0.33
CLN8-207ENST00000524258 PNOCQ13519 176 aa13□□□□□ -0.33
CLN8-207ENST00000524258 KNOP1Q1ED39 458 aaKnown RBP13□□□□□ -0.33
CLN8-207ENST00000524258 RTP2Q5QGT7 225 aa13□□□□□ -0.33
CLN8-207ENST00000524258 SPATA1Q5VX52 437 aa13□□□□□ -0.33
CLN8-207ENST00000524258 JADE1Q6IE81 842 aa13□□□□□ -0.33
CLN8-207ENST00000524258 KANK3Q6NY19 840 aa13□□□□□ -0.33
CLN8-207ENST00000524258 BRSK2Q8IWQ3 736 aa13□□□□□ -0.33
CLN8-207ENST00000524258 CD302Q8IX05 232 aa13□□□□□ -0.33
CLN8-207ENST00000524258 NELFCDQ8IXH7 590 aa13□□□□□ -0.33
CLN8-207ENST00000524258 EFCAB13Q8IY85 973 aa13□□□□□ -0.33
CLN8-207ENST00000524258 SYCP3Q8IZU3 236 aa13□□□□□ -0.33
CLN8-207ENST00000524258 GADD45GIP1Q8TAE8 222 aaPredicted RBP13□□□□□ -0.33
CLN8-207ENST00000524258 MICAL1Q8TDZ2 1067 aa13□□□□□ -0.33
CLN8-207ENST00000524258 HASPINQ8TF76 798 aa13□□□□□ -0.33
CLN8-207ENST00000524258 DDX27Q96GQ7 796 aaKnown RBP13□□□□□ -0.33
CLN8-207ENST00000524258 B3GALT6Q96L58 329 aa13□□□□□ -0.33
CLN8-207ENST00000524258 KLHL5Q96PQ7 755 aa13□□□□□ -0.33
CLN8-207ENST00000524258 CDCA3Q99618 268 aaPredicted RBP13□□□□□ -0.33
CLN8-207ENST00000524258 FAM213AQ9BRX8 229 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms