RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 RPP25Q9BUL9 199 aaKnown RBP20.62■□□□□ 0.89
PTP4A3-206ENST00000524028 MRPL4Q9BYD3 311 aaKnown RBP20.62■□□□□ 0.89
PTP4A3-206ENST00000524028 MTRRQ9UBK8 725 aa20.62■□□□□ 0.89
PTP4A3-206ENST00000524028 DAXXQ9UER7 740 aaPredicted RBP20.62■□□□□ 0.89
PTP4A3-206ENST00000524028 NUMBLQ9Y6R0 609 aa20.62■□□□□ 0.89
PTP4A3-206ENST00000524028 MTCL1Q9Y4B5 1905 aaKnown RBP20.62■□□□□ 0.89
PTP4A3-206ENST00000524028 MYO15AQ9UKN7 3530 aa20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 SLC16A4O15374 487 aa20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 ST18O60284 1047 aa20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 PROZP22891 400 aa20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 ATP2C1P98194 919 aaPredicted RBP20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 RABEP1Q15276 862 aa20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 AXDND1Q5T1B0 1012 aaPredicted RBP20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 MCTP1Q6DN14 999 aa20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 APBB1IPQ7Z5R6 666 aaPredicted RBP20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 CCDC105Q8IYK2 499 aa20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 SLC7A14Q8TBB6 771 aa20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 GPR152Q8TDT2 470 aa20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 DDX27Q96GQ7 796 aaKnown RBP20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 ZBTB45Q96K62 511 aaPredicted RBP20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 DRC1Q96MC2 740 aa20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 NTPCRQ9BSD7 190 aaKnown RBP20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 CCDC94Q9BW85 323 aaPredicted RBP20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 CA14Q9ULX7 337 aa20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 CDY1Q9Y6F8 540 aa20.61■□□□□ 0.89
PTP4A3-206ENST00000524028 CD2BP2O95400 341 aaKnown RBP20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 MCF2P10911 925 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 HOXA9P31269 272 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 NBL1P41271 181 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 YARSP54577 528 aaKnown RBP20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 RAD51AP2Q09MP3 1159 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 ZRSR1Q15695 479 aaKnown RBP20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 RILPL1Q5EBL4 403 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 HYIQ5T013 277 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 PARM1Q6UWI2 310 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 ASCL5Q7RTU5 278 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 FGF14Q92915 247 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 SNX27Q96L92 541 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 PLIN2Q99541 437 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 RTP3Q9BQQ7 232 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 TOPORSQ9NS56 1045 aaPredicted RBP20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 HCFC1R1Q9NWW0 138 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 CDH7Q9ULB5 785 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 POLIQ9UNA4 740 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 RBM19Q9Y4C8 960 aaKnown RBP20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 BACE2Q9Y5Z0 518 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 VWA8A3KMH1 1905 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 DOCK8Q8NF50 2099 aa20.6■□□□□ 0.89
PTP4A3-206ENST00000524028 GUCY2CP25092 1073 aa20.59■□□□□ 0.89
PTP4A3-206ENST00000524028 DTWD2Q8NBA8 298 aa20.59■□□□□ 0.89
PTP4A3-206ENST00000524028 ITFG1Q8TB96 612 aa20.59■□□□□ 0.89
PTP4A3-206ENST00000524028 FGF13Q92913 245 aa20.59■□□□□ 0.89
PTP4A3-206ENST00000524028 TMX3Q96JJ7 454 aa20.59■□□□□ 0.89
PTP4A3-206ENST00000524028 C17orf75Q9HAS0 396 aa20.59■□□□□ 0.89
PTP4A3-206ENST00000524028 ZFP37Q9Y6Q3 630 aaPredicted RBP20.59■□□□□ 0.89
PTP4A3-206ENST00000524028 STK25O00506 426 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 PODXLO00592 558 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 TRAPPC3O43617 180 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 KCNE1P15382 129 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 UVSSAQ2YD98 709 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 SEZ6Q53EL9 994 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 MPZL3Q6UWV2 235 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 ANKS3Q6ZW76 656 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 FRMD5Q7Z6J6 570 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 SYT2Q8N9I0 419 aaPredicted RBP20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 TMEM161BQ8NDZ6 487 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 SPIRE2Q8WWL2 714 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 C18orf25Q96B23 403 aaPredicted RBP20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 ACAP3Q96P50 834 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 TCHPQ9BT92 498 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 SLC2A4RGQ9NR83 387 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 CNTN3Q9P232 1028 aa20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 DNMT3BQ9UBC3 853 aaKnown RBP20.58■□□□□ 0.89
PTP4A3-206ENST00000524028 NPHP3-ACAD11A0A0J9YXS1 232 aa20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 VWA3AA6NCI4 1184 aa20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 XYLBO75191 536 aa20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 POU2F2P09086 479 aa20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 HARSP12081 509 aaKnown RBP20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 PLS3P13797 630 aa20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 GJB2P29033 226 aa20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 SLC12A3P55017 1021 aa20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 ANGPT1Q15389 498 aa20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 TIPINQ9BVW5 301 aa20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 TBC1D17Q9HA65 648 aa20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 SLC38A7Q9NVC3 462 aa20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 KIF3AQ9Y496 699 aa20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 DMDP11532 3685 aa20.57■□□□□ 0.88
PTP4A3-206ENST00000524028 PRR23AA6NEV1 266 aa20.56■□□□□ 0.88
PTP4A3-206ENST00000524028 TBC1D4O60343 1298 aa20.56■□□□□ 0.88
PTP4A3-206ENST00000524028 MAPTP10636 758 aaKnown RBP20.56■□□□□ 0.88
PTP4A3-206ENST00000524028 GPC5P78333 572 aa20.56■□□□□ 0.88
PTP4A3-206ENST00000524028 CACNB1Q02641 598 aaPredicted RBP20.56■□□□□ 0.88
PTP4A3-206ENST00000524028 SLC10A6Q3KNW5 377 aa20.56■□□□□ 0.88
PTP4A3-206ENST00000524028 TMEM119Q4V9L6 283 aa20.56■□□□□ 0.88
PTP4A3-206ENST00000524028 VARS2Q5ST30 1063 aaKnown RBP20.56■□□□□ 0.88
PTP4A3-206ENST00000524028 SLC8B1Q6J4K2 584 aa20.56■□□□□ 0.88
PTP4A3-206ENST00000524028 TMEM130Q8N3G9 435 aa20.56■□□□□ 0.88
PTP4A3-206ENST00000524028 ARHGEF3Q9NR81 526 aa20.56■□□□□ 0.88
PTP4A3-206ENST00000524028 DOCK6Q96HP0 2047 aa20.56■□□□□ 0.88
PTP4A3-206ENST00000524028 TOM1L1O75674 476 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms