RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ZNF529Q6P280 563 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 MAEAQ7L5Y9 396 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 APBB1IPQ7Z5R6 666 aaPredicted RBP4.89□□□□□ -1.63
SKP1-212ENST00000523966 SGMS1Q86VZ5 419 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 C1QL4Q86Z23 238 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 KIAA0319LQ8IZA0 1049 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 ANKRD35Q8N283 1001 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 FAM43AQ8N2R8 423 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 CEP95Q96GE4 821 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 BORCS6Q96GS4 357 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 KCNC2Q96PR1 638 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 PACSIN1Q9BY11 444 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 ENKD1Q9H0I2 346 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 AGO3Q9H9G7 860 aaKnown RBP4.89□□□□□ -1.63
SKP1-212ENST00000523966 PARD6AQ9NPB6 346 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 CPA4Q9UI42 421 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 TPCN1Q9ULQ1 816 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 L1RE1Q9UN81 338 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 ZFR2Q9UPR6 939 aaKnown RBP4.89□□□□□ -1.63
SKP1-212ENST00000523966 PCDHA1Q9Y5I3 950 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 DUSP10Q9Y6W6 482 aa4.89□□□□□ -1.63
SKP1-212ENST00000523966 ANO9A1A5B4 782 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 TBKBP1A7MCY6 615 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 CXorf49A8MYA2 514 aaPredicted RBP4.88□□□□□ -1.63
SKP1-212ENST00000523966 GRM6O15303 877 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 PQBP1O60828 265 aaKnown RBP4.88□□□□□ -1.63
SKP1-212ENST00000523966 RAD17O75943 681 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 CD1AP06126 327 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 IFIT2P09913 472 aaKnown RBP4.88□□□□□ -1.63
SKP1-212ENST00000523966 MGAT1P26572 445 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 MSX2P35548 267 aaPredicted RBP4.88□□□□□ -1.63
SKP1-212ENST00000523966 KCNJ5P48544 419 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 AGFG1P52594 562 aaKnown RBP4.88□□□□□ -1.63
SKP1-212ENST00000523966 USP14P54578 494 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 RAB1AP62820 205 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 PLS1Q14651 629 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 ELAVL1Q15717 326 aaKnown RBP4.88□□□□□ -1.63
SKP1-212ENST00000523966 FAM214AQ32MH5 1076 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 TBC1D10BQ4KMP7 808 aaPredicted RBP4.88□□□□□ -1.63
SKP1-212ENST00000523966 ZFYVE27Q5T4F4 411 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 ATXN7L2Q5T6C5 722 aaPredicted RBP4.88□□□□□ -1.63
SKP1-212ENST00000523966 SEM1Q6ZVN7 128 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 POLNQ7Z5Q5 900 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 XYLT1Q86Y38 959 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 PLXDC1Q8IUK5 500 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 LRTOMTQ8WZ04 291 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 ST8SIA2Q92186 375 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 TFAP2CQ92754 450 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 TNPO1Q92973 898 aaKnown RBP4.88□□□□□ -1.63
SKP1-212ENST00000523966 DMRTA2Q96SC8 542 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 PTPN18Q99952 460 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 REXO4Q9GZR2 422 aaKnown RBP4.88□□□□□ -1.63
SKP1-212ENST00000523966 NUP62CLQ9H1M0 184 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 SLAMF7Q9NQ25 335 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 DDX21Q9NR30 783 aaKnown RBP eCLIP4.88□□□□□ -1.63
SKP1-212ENST00000523966 SIDT1Q9NXL6 827 aaKnown RBP4.88□□□□□ -1.63
SKP1-212ENST00000523966 PPP4R1LQ9P1A2 415 aa4.88□□□□□ -1.63
SKP1-212ENST00000523966 TCRBV7S2A1N4TA0A589 114 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 F2RL2O00254 374 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 CYP27B1O15528 508 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 PHGDHO43175 533 aaKnown RBP4.87□□□□□ -1.63
SKP1-212ENST00000523966 STC2O76061 302 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 NKX6-1P78426 367 aaPredicted RBP4.87□□□□□ -1.63
SKP1-212ENST00000523966 UBE4AQ14139 1066 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 BMT2Q1RMZ1 405 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 TCTN3Q6NUS6 607 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 DOK3Q7L591 496 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 IL17RDQ8NFM7 739 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 FBXO41Q8TF61 875 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 MIEF2Q96C03 454 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 FAM89AQ96GI7 184 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 TNIP3Q96KP6 325 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 LRFN3Q9BTN0 628 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 LRRC27Q9C0I9 530 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 MEGF9Q9H1U4 602 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 BRD9Q9H8M2 597 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 PIH1D1Q9NWS0 290 aaKnown RBP4.87□□□□□ -1.63
SKP1-212ENST00000523966 CFAP97Q9P2B7 532 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 HECAQ9UBI9 543 aaPredicted RBP4.87□□□□□ -1.63
SKP1-212ENST00000523966 STAP2Q9UGK3 403 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 ATRNL1Q5VV63 1379 aa4.87□□□□□ -1.63
SKP1-212ENST00000523966 A6NNZ2 444 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 CAPN14A8MX76 684 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 APAF1O14727 1248 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 GNAI2P04899 355 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 PEX2P28328 305 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 PRDX5P30044 214 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 PIK3CGP48736 1102 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 MXRA7P84157 204 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 IFIT5Q13325 482 aaKnown RBP4.86□□□□□ -1.63
SKP1-212ENST00000523966 BIRC2Q13490 618 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 UBXN2BQ14CS0 331 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 POLD3Q15054 466 aaPredicted RBP4.86□□□□□ -1.63
SKP1-212ENST00000523966 DACT2Q5SW24 774 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 SYCP2LQ5T4T6 812 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 IL31Q6EBC2 164 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 LCNL1Q6ZST4 164 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 UBE3BQ7Z3V4 1068 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 LIMS2Q7Z4I7 341 aa4.86□□□□□ -1.63
SKP1-212ENST00000523966 ELOA2Q8IYF1 753 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms