RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 hCG_1984214I3L0E3 225 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 FSCN2O14926 492 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 TTC4O95801 387 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 CETPP11597 493 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 CDK4P11802 303 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 TARSP26639 723 aaKnown RBP8.92□□□□□ -0.98
CSMD1-213ENST00000523488 POLR2FP61218 127 aaKnown RBP8.92□□□□□ -0.98
CSMD1-213ENST00000523488 MSLNQ13421 630 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-213ENST00000523488 UBE4AQ14139 1066 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 SLC15A2Q16348 729 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.92□□□□□ -0.98
CSMD1-213ENST00000523488 IRAK1BP1Q5VVH5 260 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 ZNF554Q86TJ5 538 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 ALLCQ8N6M5 410 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 ZNF713Q8N859 430 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-213ENST00000523488 ADAMTS16Q8TE57 1224 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 TGS1Q96RS0 853 aaKnown RBP8.92□□□□□ -0.98
CSMD1-213ENST00000523488 PITPNM3Q9BZ71 974 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 NACAP1Q9BZK3 213 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 UBA5Q9GZZ9 404 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 USP29Q9HBJ7 922 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 ASTN2O75129 1339 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-213ENST00000523488 MAPK13O15264 365 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 C8BP07358 591 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 MAGEA10P43363 369 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-213ENST00000523488 USP46P62068 366 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 FKBP3Q00688 224 aaKnown RBP8.92□□□□□ -0.98
CSMD1-213ENST00000523488 AMPD3Q01432 767 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 STRN3Q13033 797 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 TRABD2AQ86V40 505 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 RAD54LQ92698 747 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 CATSPER2Q96P56 530 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 LRRC37BQ96QE4 947 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 TSG101Q99816 390 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 KIAA1586Q9HCI6 787 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 MKS1Q9NXB0 559 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 SENP1Q9P0U3 644 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 OPHN1O60890 802 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 ENTPD5O75356 428 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 INHBBP09529 407 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 FGFR1P11362 822 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 HARSP12081 509 aaKnown RBP8.92□□□□□ -0.98
CSMD1-213ENST00000523488 RFX1P22670 979 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 PHKA1P46020 1223 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 ACTR3P61158 418 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 ASIC2Q16515 512 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 SYDE2Q5VT97 1194 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 OLFML2BQ68BL8 750 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 PI16Q6UXB8 463 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 ARHGEF18Q6ZSZ5 1173 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 ZNF34Q8IZ26 560 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 TTC25Q96NG3 672 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 HNRNPABQ99729 332 aaKnown RBP8.92□□□□□ -0.98
CSMD1-213ENST00000523488 ECSITQ9BQ95 431 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 ZBTB3Q9H5J0 574 aa8.92□□□□□ -0.98
CSMD1-213ENST00000523488 PTPN2P17706 415 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 HOXD13P35453 343 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 MFSD4BQ5TF39 518 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 PHLDB3Q6NSJ2 640 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 CCDC174Q6PII3 467 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 FNDC8Q8TC99 324 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 MCUR1Q96AQ8 359 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 DGCR14Q96DF8 476 aaKnown RBP8.91□□□□□ -0.98
CSMD1-213ENST00000523488 LRRC27Q9C0I9 530 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 SENP6Q9GZR1 1112 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-213ENST00000523488 A0A1W2PRG0 241 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 TTLL13PA6NNM8 815 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 HNRNPRO43390 633 aaKnown RBP8.91□□□□□ -0.98
CSMD1-213ENST00000523488 TPD52L2O43399 206 aaKnown RBP8.91□□□□□ -0.98
CSMD1-213ENST00000523488 FGGP02679 453 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 VAV1P15498 845 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 ATF7P17544 494 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-213ENST00000523488 ADCY1Q08828 1119 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 MPP3Q13368 585 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 PLEKHG4Q58EX7 1191 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 CFAP157Q5JU67 520 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 PGM2L1Q6PCE3 622 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 VPS36Q86VN1 386 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 VPS52Q8N1B4 723 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 ERMNQ8TAM6 284 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 DTX3LQ8TDB6 740 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 TRPC4APQ8TEL6 797 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 CCT7Q99832 543 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 LSM14BQ9BX40 385 aaKnown RBP8.91□□□□□ -0.98
CSMD1-213ENST00000523488 HESX1Q9UBX0 185 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 MAD2L2Q9UI95 211 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 AJAP1Q9UKB5 411 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-213ENST00000523488 SMG5Q9UPR3 1016 aaKnown RBP8.91□□□□□ -0.98
CSMD1-213ENST00000523488 SH3GLB1Q9Y371 365 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 E2F6O75461 281 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 TSHRP16473 764 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 ITIH2P19823 946 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 PON1P27169 355 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 CCDC92Q53HC0 331 aaPredicted RBP8.91□□□□□ -0.98
CSMD1-213ENST00000523488 RFWD3Q6PCD5 774 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 RNF111Q6ZNA4 994 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 CATIPQ7Z7H3 387 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 LCORLQ8N3X6 602 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 LZTR1Q8N653 840 aa8.91□□□□□ -0.98
CSMD1-213ENST00000523488 ALG3Q92685 438 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms