RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 MTRRQ9UBK8 725 aa28.56■■■□□ 2.16
PVT1-219ENST00000523427 CYP11B2P19099 503 aa28.55■■■□□ 2.16
PVT1-219ENST00000523427 UVSSAQ2YD98 709 aa28.55■■■□□ 2.16
PVT1-219ENST00000523427 TPRG1Q6ZUI0 275 aa28.55■■■□□ 2.16
PVT1-219ENST00000523427 GTF3C6Q969F1 213 aa28.55■■■□□ 2.16
PVT1-219ENST00000523427 DDX23Q9BUQ8 820 aaKnown RBP28.55■■■□□ 2.16
PVT1-219ENST00000523427 CCDC113Q9H0I3 377 aa28.55■■■□□ 2.16
PVT1-219ENST00000523427 NAMPTP43490 491 aa28.54■■■□□ 2.16
PVT1-219ENST00000523427 BRCC3P46736 316 aa28.54■■■□□ 2.16
PVT1-219ENST00000523427 ARPP19P56211 112 aa28.54■■■□□ 2.16
PVT1-219ENST00000523427 ATRIPQ8WXE1 791 aa28.54■■■□□ 2.16
PVT1-219ENST00000523427 PLA2G2FQ9BZM2 168 aa28.54■■■□□ 2.16
PVT1-219ENST00000523427 KCNH3Q9ULD8 1083 aa28.54■■■□□ 2.16
PVT1-219ENST00000523427 MIA3Q5JRA6 1907 aa28.53■■■□□ 2.16
PVT1-219ENST00000523427 ZNF174Q15697 407 aa28.53■■■□□ 2.16
PVT1-219ENST00000523427 DCAF4L1Q3SXM0 396 aa28.53■■■□□ 2.16
PVT1-219ENST00000523427 ZBTB41Q5SVQ8 909 aa28.53■■■□□ 2.16
PVT1-219ENST00000523427 TSSK4Q6SA08 328 aa28.53■■■□□ 2.16
PVT1-219ENST00000523427 ERMNQ8TAM6 284 aa28.53■■■□□ 2.16
PVT1-219ENST00000523427 POLR3CQ9BUI4 534 aaPredicted RBP28.53■■■□□ 2.16
PVT1-219ENST00000523427 NCOR2Q9Y618 2525 aa28.53■■■□□ 2.16
PVT1-219ENST00000523427 VWA8A3KMH1 1905 aa28.53■■■□□ 2.16
PVT1-219ENST00000523427 RHOP08100 348 aa28.52■■■□□ 2.16
PVT1-219ENST00000523427 TARSP26639 723 aaKnown RBP28.52■■■□□ 2.16
PVT1-219ENST00000523427 OSTNP61366 133 aa28.52■■■□□ 2.16
PVT1-219ENST00000523427 PPP2R5AQ15172 486 aa28.52■■■□□ 2.16
PVT1-219ENST00000523427 RSPO4Q2I0M5 234 aaPredicted RBP28.52■■■□□ 2.16
PVT1-219ENST00000523427 SLC5A9Q2M3M2 681 aa28.52■■■□□ 2.16
PVT1-219ENST00000523427 VARS2Q5ST30 1063 aaKnown RBP28.52■■■□□ 2.16
PVT1-219ENST00000523427 NT5DC1Q5TFE4 455 aa28.52■■■□□ 2.16
PVT1-219ENST00000523427 ATF7IP2Q5U623 682 aa28.52■■■□□ 2.16
PVT1-219ENST00000523427 DDX27Q96GQ7 796 aaKnown RBP28.52■■■□□ 2.16
PVT1-219ENST00000523427 IFT74Q96LB3 600 aa28.52■■■□□ 2.16
PVT1-219ENST00000523427 PPP1R10Q96QC0 940 aaKnown RBP28.52■■■□□ 2.16
PVT1-219ENST00000523427 HEBP1Q9NRV9 189 aa28.52■■■□□ 2.16
PVT1-219ENST00000523427 FBXO4Q9UKT5 387 aa28.52■■■□□ 2.16
PVT1-219ENST00000523427 CEBPBP17676 345 aa28.51■■■□□ 2.15
PVT1-219ENST00000523427 ELF1P32519 619 aa28.51■■■□□ 2.15
PVT1-219ENST00000523427 CD300LGQ6UXG3 332 aa28.51■■■□□ 2.15
PVT1-219ENST00000523427 ANKS3Q6ZW76 656 aa28.51■■■□□ 2.15
PVT1-219ENST00000523427 C3orf58Q8NDZ4 430 aa28.51■■■□□ 2.15
PVT1-219ENST00000523427 FANCMQ8IYD8 2048 aa28.5■■■□□ 2.15
PVT1-219ENST00000523427 PRRG1O14668 218 aa28.5■■■□□ 2.15
PVT1-219ENST00000523427 TRAPPC3O43617 180 aa28.5■■■□□ 2.15
PVT1-219ENST00000523427 LRG1P02750 347 aa28.5■■■□□ 2.15
PVT1-219ENST00000523427 UPP1Q16831 310 aa28.5■■■□□ 2.15
PVT1-219ENST00000523427 ZNF528Q3MIS6 628 aa28.5■■■□□ 2.15
PVT1-219ENST00000523427 TANGO2Q6ICL3 276 aa28.5■■■□□ 2.15
PVT1-219ENST00000523427 POTEHQ6S545 545 aa28.5■■■□□ 2.15
PVT1-219ENST00000523427 CEP120Q8N960 986 aa28.5■■■□□ 2.15
PVT1-219ENST00000523427 CORO1BQ9BR76 489 aa28.5■■■□□ 2.15
PVT1-219ENST00000523427 OSBPL6Q9BZF3 934 aa28.5■■■□□ 2.15
PVT1-219ENST00000523427 BACE2Q9Y5Z0 518 aa28.5■■■□□ 2.15
PVT1-219ENST00000523427 NOTCH4Q99466 2003 aa28.49■■■□□ 2.15
PVT1-219ENST00000523427 TMEM189-UBE2V1I3L0A0 370 aa28.49■■■□□ 2.15
PVT1-219ENST00000523427 POU2F2P09086 479 aa28.49■■■□□ 2.15
PVT1-219ENST00000523427 RPA1P27694 616 aa28.49■■■□□ 2.15
PVT1-219ENST00000523427 RBM25P49756 843 aaKnown RBP28.49■■■□□ 2.15
PVT1-219ENST00000523427 SAFBQ15424 915 aaKnown RBP eCLIP28.49■■■□□ 2.15
PVT1-219ENST00000523427 SMIM28A0A1B0GU29 152 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 K7ERI5 159 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 SPTLC1O15269 473 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 ECI2O75521 394 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 OR52Z1P0C646 297 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 PTPN2P17706 415 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 EFNA5P52803 228 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 ROR1Q01973 937 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 SOX4Q06945 474 aaPredicted RBP28.48■■■□□ 2.15
PVT1-219ENST00000523427 GRM2Q14416 872 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 ZNF852Q6ZMS4 543 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 UROC1Q96N76 676 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 BHMT2Q9H2M3 363 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 DLL3Q9NYJ7 618 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 GDE1Q9NZC3 331 aa28.48■■■□□ 2.15
PVT1-219ENST00000523427 NDRG2Q9UN36 371 aaKnown RBP28.48■■■□□ 2.15
PVT1-219ENST00000523427 NCAM2O15394 837 aa28.47■■■□□ 2.15
PVT1-219ENST00000523427 CCT6AP40227 531 aaKnown RBP28.47■■■□□ 2.15
PVT1-219ENST00000523427 YARSP54577 528 aaKnown RBP28.47■■■□□ 2.15
PVT1-219ENST00000523427 ECM1Q16610 540 aa28.47■■■□□ 2.15
PVT1-219ENST00000523427 APBB1IPQ7Z5R6 666 aaPredicted RBP28.47■■■□□ 2.15
PVT1-219ENST00000523427 TCEAL4Q96EI5 215 aa28.47■■■□□ 2.15
PVT1-219ENST00000523427 NELL2Q99435 816 aa28.47■■■□□ 2.15
PVT1-219ENST00000523427 CYP4F11Q9HBI6 524 aa28.47■■■□□ 2.15
PVT1-219ENST00000523427 ZSCAN32Q9NX65 697 aa28.47■■■□□ 2.15
PVT1-219ENST00000523427 PCDHGA2Q9Y5H1 932 aa28.47■■■□□ 2.15
PVT1-219ENST00000523427 CCDC169A6NNP5 214 aa28.46■■■□□ 2.15
PVT1-219ENST00000523427 ANAPC15P60006 121 aa28.46■■■□□ 2.15
PVT1-219ENST00000523427 ZNF461Q8TAF7 563 aa28.46■■■□□ 2.15
PVT1-219ENST00000523427 CCDC94Q9BW85 323 aaPredicted RBP28.46■■■□□ 2.15
PVT1-219ENST00000523427 BRD9Q9H8M2 597 aa28.46■■■□□ 2.15
PVT1-219ENST00000523427 SMG5Q9UPR3 1016 aaKnown RBP28.46■■■□□ 2.15
PVT1-219ENST00000523427 SPTBN2O15020 2390 aa28.45■■■□□ 2.15
PVT1-219ENST00000523427 WDR27A2RRH5 827 aa28.45■■■□□ 2.14
PVT1-219ENST00000523427 MAGEA9P43362 315 aa28.45■■■□□ 2.14
PVT1-219ENST00000523427 NEK4P51957 841 aa28.45■■■□□ 2.14
PVT1-219ENST00000523427 ZNF568Q3ZCX4 644 aa28.45■■■□□ 2.14
PVT1-219ENST00000523427 RTL10Q7L3V2 364 aa28.45■■■□□ 2.14
PVT1-219ENST00000523427 KIFAP3Q92845 792 aa28.45■■■□□ 2.14
PVT1-219ENST00000523427 CLDN23Q96B33 292 aa28.45■■■□□ 2.14
PVT1-219ENST00000523427 KIAA1024Q9UPX6 916 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms