RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 ELAVL2Q12926 359 aaKnown RBP16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 UBXN2BQ14CS0 331 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 ANKRD1Q15327 319 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 UVSSAQ2YD98 709 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 PABPC1LQ4VXU2 614 aaKnown RBP16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 ZC3H14Q6PJT7 736 aaKnown RBP16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 FANCMQ8IYD8 2048 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 RUBCNQ92622 972 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 DDX27Q96GQ7 796 aaKnown RBP16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 HINFPQ9BQA5 517 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 LTB4R2Q9NPC1 389 aa16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 SPATA6Q9NWH7 488 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC9-213ENST00000522504 ARHGEF35A5YM69 484 aa16.82■□□□□ 0.28
TRAPPC9-213ENST00000522504 TMEM189-UBE2V1I3L0A0 370 aa16.82■□□□□ 0.28
TRAPPC9-213ENST00000522504 RPA1P27694 616 aa16.82■□□□□ 0.28
TRAPPC9-213ENST00000522504 BRCC3P46736 316 aa16.82■□□□□ 0.28
TRAPPC9-213ENST00000522504 ANAPC15P60006 121 aa16.82■□□□□ 0.28
TRAPPC9-213ENST00000522504 UPP1Q16831 310 aa16.82■□□□□ 0.28
TRAPPC9-213ENST00000522504 PDXDC1Q6P996 788 aa16.82■□□□□ 0.28
TRAPPC9-213ENST00000522504 DGLUCYQ7Z3D6 616 aa16.82■□□□□ 0.28
TRAPPC9-213ENST00000522504 CEP120Q8N960 986 aa16.82■□□□□ 0.28
TRAPPC9-213ENST00000522504 DEPTORQ8TB45 409 aa16.82■□□□□ 0.28
TRAPPC9-213ENST00000522504 MCRS1Q96EZ8 462 aa16.82■□□□□ 0.28
TRAPPC9-213ENST00000522504 ADPGKQ9BRR6 497 aa16.82■□□□□ 0.28
TRAPPC9-213ENST00000522504 KCNH3Q9ULD8 1083 aa16.82■□□□□ 0.28
TRAPPC9-213ENST00000522504 SPTBN2O15020 2390 aa16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 RHOP08100 348 aa16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 CEBPBP17676 345 aa16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 TARSP26639 723 aaKnown RBP16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 RBM25P49756 843 aaKnown RBP16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 CSTF1Q05048 431 aaKnown RBP16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 FZD5Q13467 585 aa16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 ZNF174Q15697 407 aa16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 DCAF4L1Q3SXM0 396 aa16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 ATF7IP2Q5U623 682 aa16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 TANGO2Q6ICL3 276 aa16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 BCO2Q9BYV7 579 aa16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 DLL3Q9NYJ7 618 aa16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 MRPS23Q9Y3D9 190 aaKnown RBP16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 BACE2Q9Y5Z0 518 aa16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 EPG5Q9HCE0 2579 aa16.81■□□□□ 0.28
TRAPPC9-213ENST00000522504 SMIM28A0A1B0GU29 152 aa16.8■□□□□ 0.28
TRAPPC9-213ENST00000522504 LAMTOR5O43504 91 aa16.8■□□□□ 0.28
TRAPPC9-213ENST00000522504 KINO60870 393 aaKnown RBP16.8■□□□□ 0.28
TRAPPC9-213ENST00000522504 ZNF528Q3MIS6 628 aa16.8■□□□□ 0.28
TRAPPC9-213ENST00000522504 TSSK4Q6SA08 328 aa16.8■□□□□ 0.28
TRAPPC9-213ENST00000522504 TPRG1Q6ZUI0 275 aa16.8■□□□□ 0.28
TRAPPC9-213ENST00000522504 TCEAL4Q96EI5 215 aa16.8■□□□□ 0.28
TRAPPC9-213ENST00000522504 OSBPL6Q9BZF3 934 aa16.8■□□□□ 0.28
TRAPPC9-213ENST00000522504 FBXO4Q9UKT5 387 aa16.8■□□□□ 0.28
TRAPPC9-213ENST00000522504 MEFVO15553 781 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 TBC1D4O60343 1298 aa16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 ECI2O75521 394 aa16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 OR52Z1P0C646 297 aa16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 FCARP24071 287 aa16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 PFKPQ01813 784 aa16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 ROR1Q01973 937 aa16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 TRIM29Q14134 588 aa16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 XKR4Q5GH76 650 aa16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 ALKAL1Q6UXT8 129 aa16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 C4orf32Q8N8J7 132 aa16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 CLDN23Q96B33 292 aa16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 ZMAT2Q96NC0 199 aaKnown RBP16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 BHMT2Q9H2M3 363 aa16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 HEBP1Q9NRV9 189 aa16.79■□□□□ 0.28
TRAPPC9-213ENST00000522504 ARHGEF37A1IGU5 675 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 WDR27A2RRH5 827 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 ABLIM3O94929 683 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 SEC24AO95486 1093 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 CCR2P41597 374 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 EFNA5P52803 228 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 OSTNP61366 133 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 NBR1Q14596 966 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 PUM1Q14671 1186 aaKnown RBP eCLIP16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 PPP2R5AQ15172 486 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 PRSS36Q5K4E3 855 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 VARS2Q5ST30 1063 aaKnown RBP16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 ZBTB41Q5SVQ8 909 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 SLC8B1Q6J4K2 584 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 ANKS3Q6ZW76 656 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 RTL10Q7L3V2 364 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 TAS1R3Q7RTX0 852 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 DAW1Q8N136 415 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 ZNF687Q8N1G0 1237 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 TMEM130Q8N3G9 435 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 ZBTB44Q8NCP5 570 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 NELL1Q92832 810 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 CDT1Q9H211 546 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 PTPRHQ9HD43 1115 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 AVENQ9NQS1 362 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 GDE1Q9NZC3 331 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 TNFSF13BQ9Y275 285 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 MIA3Q5JRA6 1907 aa16.78■□□□□ 0.28
TRAPPC9-213ENST00000522504 CCT6AP40227 531 aaKnown RBP16.77■□□□□ 0.28
TRAPPC9-213ENST00000522504 GRM5P41594 1212 aa16.77■□□□□ 0.28
TRAPPC9-213ENST00000522504 NEK4P51957 841 aa16.77■□□□□ 0.28
TRAPPC9-213ENST00000522504 GRM2Q14416 872 aa16.77■□□□□ 0.28
TRAPPC9-213ENST00000522504 RSPO4Q2I0M5 234 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC9-213ENST00000522504 FAM78AQ5JUQ0 283 aa16.77■□□□□ 0.28
TRAPPC9-213ENST00000522504 ZNF461Q8TAF7 563 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms