RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 TECP42680 631 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 QARSP47897 775 aaKnown RBP8.97□□□□□ -0.97
PVT1-213ENST00000522414 BCAR1P56945 870 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 PSMC5P62195 406 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 KRT17Q04695 432 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 HERC4Q5GLZ8 1057 aaPredicted RBP8.97□□□□□ -0.97
PVT1-213ENST00000522414 TWF2Q6IBS0 349 aaKnown RBP8.97□□□□□ -0.97
PVT1-213ENST00000522414 GALNT17Q6IS24 598 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 PSAPL1Q6NUJ1 521 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 SYCE2Q6PIF2 218 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 PIK3AP1Q6ZUJ8 805 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 KRT25Q7Z3Z0 450 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 TMEM173Q86WV6 379 aaPredicted RBP8.97□□□□□ -0.97
PVT1-213ENST00000522414 PRPF31Q8WWY3 499 aaKnown RBP8.97□□□□□ -0.97
PVT1-213ENST00000522414 AUTS2Q8WXX7 1259 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 EDAQ92838 391 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 TMEM143Q96AN5 459 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 SUSD3Q96L08 255 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 NLRP4Q96MN2 994 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 POP1Q99575 1024 aaKnown RBP8.97□□□□□ -0.97
PVT1-213ENST00000522414 PHACTR1Q9C0D0 580 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 TSPAN10Q9H1Z9 355 aaPredicted RBP8.97□□□□□ -0.97
PVT1-213ENST00000522414 IFT122Q9HBG6 1241 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 KCNMB3Q9NPA1 279 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 ENTPD7Q9NQZ7 604 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 CYP26B1Q9NR63 512 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 CHST12Q9NRB3 414 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 VAV3Q9UKW4 847 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 LZTS1Q9Y250 596 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 TECTAO75443 2155 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 ZDBF2Q9HCK1 2354 aa8.97□□□□□ -0.97
PVT1-213ENST00000522414 DMDP11532 3685 aa8.96□□□□□ -0.97
PVT1-213ENST00000522414 CCDC194A0A1B0GVG4 234 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 C2orf71A6NGG8 1288 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 MARCH6O60337 910 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 PFKFB2O60825 505 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 OFD1O75665 1012 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 FDPSP14324 419 aaKnown RBP8.96□□□□□ -0.98
PVT1-213ENST00000522414 SP100P23497 879 aaPredicted RBP8.96□□□□□ -0.98
PVT1-213ENST00000522414 SOX11P35716 441 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 ALDH7A1P49419 539 aaKnown RBP8.96□□□□□ -0.98
PVT1-213ENST00000522414 CDC42EP1Q00587 391 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 PPP2R5CQ13362 524 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 CTTNQ14247 550 aaKnown RBP8.96□□□□□ -0.98
PVT1-213ENST00000522414 PPP4R3AQ6IN85 833 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 PDE12Q6L8Q7 609 aaKnown RBP8.96□□□□□ -0.98
PVT1-213ENST00000522414 ANKRD54Q6NXT1 300 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 MOXD1Q6UVY6 613 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 TMEM184AQ6ZMB5 413 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 ZNF280BQ86YH2 543 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 SLC39A11Q8N1S5 342 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 LRRC43Q8N309 656 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 C12orf76Q8N812 135 aaPredicted RBP8.96□□□□□ -0.98
PVT1-213ENST00000522414 FEZF2Q8TBJ5 459 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 SUSD6Q92537 303 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 CEP170P1Q96L14 293 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 FAM20AQ96MK3 541 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 PHF7Q9BWX1 381 aaPredicted RBP8.96□□□□□ -0.98
PVT1-213ENST00000522414 MINDY3Q9H8M7 445 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 NGRNQ9NPE2 291 aaKnown RBP8.96□□□□□ -0.98
PVT1-213ENST00000522414 DACT1Q9NYF0 836 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 ORC3Q9UBD5 711 aaPredicted RBP8.96□□□□□ -0.98
PVT1-213ENST00000522414 PIN4Q9Y237 131 aaKnown RBP8.96□□□□□ -0.98
PVT1-213ENST00000522414 INPP5FQ9Y2H2 1132 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 ZNF318Q5VUA4 2279 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 USP34Q70CQ2 3546 aa8.96□□□□□ -0.98
PVT1-213ENST00000522414 WDR87Q6ZQQ6 2873 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 B4GALT3O60512 393 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 CLASP2O75122 1294 aaKnown RBP8.95□□□□□ -0.98
PVT1-213ENST00000522414 SLITRK3O94933 977 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 P4HBP07237 508 aaKnown RBP8.95□□□□□ -0.98
PVT1-213ENST00000522414 WEE2P0C1S8 567 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 HOXA11P31270 313 aaPredicted RBP8.95□□□□□ -0.98
PVT1-213ENST00000522414 CA8P35219 290 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 AK2P54819 239 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 CYP4A11Q02928 519 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 LAMTOR4Q0VGL1 99 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 CBX2Q14781 532 aaPredicted RBP8.95□□□□□ -0.98
PVT1-213ENST00000522414 EPHA7Q15375 998 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 ME3Q16798 604 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 CATSPER4Q7RTX7 472 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 NEK8Q86SG6 692 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 TPH2Q8IWU9 490 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 VPS52Q8N1B4 723 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 DEPDC4Q8N2C3 294 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 BCL7CQ8WUZ0 217 aaPredicted RBP8.95□□□□□ -0.98
PVT1-213ENST00000522414 WFDC12Q8WWY7 111 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 PBXIP1Q96AQ6 731 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 DYDC2Q96IM9 177 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 FBXL18Q96ME1 805 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 CDCA3Q99618 268 aaPredicted RBP8.95□□□□□ -0.98
PVT1-213ENST00000522414 GBP3Q9H0R5 595 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 NRDE2Q9H7Z3 1164 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 FAM105AQ9NUU6 356 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 TBC1D13Q9NVG8 400 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 DNAJB12Q9NXW2 375 aaKnown RBP8.95□□□□□ -0.98
PVT1-213ENST00000522414 DNAJB4Q9UDY4 337 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 KIAA1024Q9UPX6 916 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 PCDHB2Q9Y5E7 798 aa8.95□□□□□ -0.98
PVT1-213ENST00000522414 HCFC2Q9Y5Z7 792 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms