RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 AGMOQ6ZNB7 445 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 SLC24A5Q71RS6 500 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 APTXQ7Z2E3 356 aaKnown RBP13.4□□□□□ -0.26
PABPC1-219ENST00000522387 TMC6Q7Z403 805 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 FAM114A1Q8IWE2 563 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 LRRC8AQ8IWT6 810 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 ANKRD20A12PQ8NF67 263 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 SLC35C1Q96A29 364 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 MTMR12Q9C0I1 747 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 SQORQ9Y6N5 450 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 TANC1Q9C0D5 1861 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 CITO14578 2027 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 CLTAP09496 248 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 ITGA4P13612 1032 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 GRM5P41594 1212 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 COPB1P53618 953 aaKnown RBP13.4□□□□□ -0.26
PABPC1-219ENST00000522387 UBXN1Q04323 297 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 IKBKEQ14164 716 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 NFIL3Q16649 462 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 C1orf220Q5T0J3 134 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 ZNF365Q70YC5 407 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 INTS8Q75QN2 995 aaKnown RBP13.4□□□□□ -0.26
PABPC1-219ENST00000522387 FRMD5Q7Z6J6 570 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 GPIHBP1Q8IV16 184 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 TRIM59Q8IWR1 403 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 EFCAB13Q8IY85 973 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 ZNF516Q92618 1163 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 C18orf25Q96B23 403 aaPredicted RBP13.4□□□□□ -0.26
PABPC1-219ENST00000522387 NDST4Q9H3R1 872 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 RGS18Q9NS28 235 aa13.4□□□□□ -0.26
PABPC1-219ENST00000522387 C5orf42Q9H799 3197 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 C9IYK1 514 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 SLC16A3O15427 465 aaKnown RBP13.39□□□□□ -0.27
PABPC1-219ENST00000522387 CXCL10P02778 98 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 EEF1GP26641 437 aaKnown RBP13.39□□□□□ -0.27
PABPC1-219ENST00000522387 DEFB103AP81534 67 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 PPP2R3AQ06190 1150 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 BIRC3Q13489 604 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 SYCP1Q15431 976 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 PAN2Q504Q3 1202 aaKnown RBP13.39□□□□□ -0.27
PABPC1-219ENST00000522387 ECHDC2Q86YB7 292 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 HELQQ8TDG4 1101 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 KIF12Q96FN5 646 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 MFSD14AQ96MC6 490 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
PABPC1-219ENST00000522387 INTS13Q9NVM9 706 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 MIOSQ9NXC5 875 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 CXXC1Q9P0U4 656 aaPredicted RBP13.39□□□□□ -0.27
PABPC1-219ENST00000522387 HCSTQ9UBK5 93 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 PAXBP1Q9Y5B6 917 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 ARL5CA6NH57 179 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 GNA14O95837 355 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 KRT19P08727 400 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 SCNN1GP51170 649 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 FPGSQ05932 587 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 VWA3BQ502W6 1294 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 BRSK2Q8IWQ3 736 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.39□□□□□ -0.272e-8■□□□□ 9.6
PABPC1-219ENST00000522387 PI4K2AQ9BTU6 479 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 KIAA1586Q9HCI6 787 aa13.39□□□□□ -0.27
PABPC1-219ENST00000522387 TTC26A0AVF1 554 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 CAPN2P17655 700 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 MYBPC2Q14324 1141 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 MAN2A1Q16706 1144 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 CCDC112Q8NEF3 446 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 PCMTD1Q96MG8 357 aaPredicted RBP13.38□□□□□ -0.27
PABPC1-219ENST00000522387 LBHD1Q9BQE6 289 aaPredicted RBP13.38□□□□□ -0.27
PABPC1-219ENST00000522387 MKNK1Q9BUB5 465 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 METTL14Q9HCE5 456 aaKnown RBP13.38□□□□□ -0.27
PABPC1-219ENST00000522387 TUBGCP4Q9UGJ1 667 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 LIMA1Q9UHB6 759 aaKnown RBP13.38□□□□□ -0.27
PABPC1-219ENST00000522387 LRFN2Q9ULH4 789 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 PCDHB7Q9Y5E2 793 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 SMIM28A0A1B0GU29 152 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 USP27XA6NNY8 438 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 AFPP02771 609 aaKnown RBP13.38□□□□□ -0.27
PABPC1-219ENST00000522387 IGFBP6P24592 240 aaPredicted RBP13.38□□□□□ -0.27
PABPC1-219ENST00000522387 CNKSR3Q6P9H4 555 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 SV2AQ7L0J3 742 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 APBB1IPQ7Z5R6 666 aaPredicted RBP13.38□□□□□ -0.27
PABPC1-219ENST00000522387 RPUSD2Q8IZ73 545 aaKnown RBP13.38□□□□□ -0.27
PABPC1-219ENST00000522387 GSTCDQ8NEC7 633 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 TMEM117Q9H0C3 514 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 RSAD1Q9HA92 442 aa13.38□□□□□ -0.27
PABPC1-219ENST00000522387 CST3P01034 146 aaPredicted RBP13.37□□□□□ -0.27
PABPC1-219ENST00000522387 TMEM191BP0C7N4 346 aa13.37□□□□□ -0.27
PABPC1-219ENST00000522387 SKILP12757 684 aa13.37□□□□□ -0.27
PABPC1-219ENST00000522387 ACTN1P12814 892 aa13.37□□□□□ -0.27
PABPC1-219ENST00000522387 PSMD6Q15008 389 aa13.37□□□□□ -0.27
PABPC1-219ENST00000522387 FOXR2Q6PJQ5 311 aa13.37□□□□□ -0.27
PABPC1-219ENST00000522387 ZNF592Q92610 1267 aa13.37□□□□□ -0.27
PABPC1-219ENST00000522387 APBB2Q92870 758 aa13.37□□□□□ -0.27
PABPC1-219ENST00000522387 SNX27Q96L92 541 aa13.37□□□□□ -0.27
PABPC1-219ENST00000522387 RPS6KC1Q96S38 1066 aa13.37□□□□□ -0.27
PABPC1-219ENST00000522387 PAAF1Q9BRP4 392 aa13.37□□□□□ -0.27
PABPC1-219ENST00000522387 IL23AQ9NPF7 189 aa13.37□□□□□ -0.27
PABPC1-219ENST00000522387 SPTBN5Q9NRC6 3674 aaKnown RBP13.37□□□□□ -0.27
PABPC1-219ENST00000522387 CASTOR2A6NHX0 329 aa13.36□□□□□ -0.27
PABPC1-219ENST00000522387 PTGESO14684 152 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms