RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 BMS1Q14692 1282 aaKnown RBP7.42□□□□□ -1.22
SPIDR-218ENST00000522222 RRAGBQ5VZM2 374 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 PLPP4Q5VZY2 271 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 E4F1Q66K89 784 aaPredicted RBP7.42□□□□□ -1.22
SPIDR-218ENST00000522222 SPECC1LQ69YQ0 1117 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 ARMCX5Q6P1M9 558 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 ADGRD2Q7Z7M1 963 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 ZNF280BQ86YH2 543 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 PDILTQ8N807 584 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 MNS1Q8NEH6 495 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 ANKRD20A12PQ8NF67 263 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 PKNOX2Q96KN3 472 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 GSDMAQ96QA5 445 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 RPS6KC1Q96S38 1066 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 ADPGKQ9BRR6 497 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 TARS2Q9BW92 718 aaKnown RBP7.42□□□□□ -1.22
SPIDR-218ENST00000522222 ZHX3Q9H4I2 956 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 TMEM134Q9H6X4 195 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 UBE2ZQ9H832 354 aaPredicted RBP7.42□□□□□ -1.22
SPIDR-218ENST00000522222 PARVGQ9HBI0 331 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 UBN1Q9NPG3 1134 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 TLR9Q9NR96 1032 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 RMND1Q9NWS8 449 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 KLK14Q9P0G3 267 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 ANKFY1Q9P2R3 1169 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 PARP2Q9UGN5 583 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 LZTS1Q9Y250 596 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 TNFSF13BQ9Y275 285 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 GIT1Q9Y2X7 761 aa7.42□□□□□ -1.22
SPIDR-218ENST00000522222 TDRD15B5MCY1 1934 aaKnown RBP7.41□□□□□ -1.22
SPIDR-218ENST00000522222 MYMKA6NI61 221 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 F8W810 466 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 BIN1O00499 593 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 TBX10O75333 385 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 DDHD2O94830 711 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 MYL1P05976 194 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 TUBBP07437 444 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 GALTP07902 379 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 HARSP12081 509 aaKnown RBP7.41□□□□□ -1.22
SPIDR-218ENST00000522222 PROZP22891 400 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 ALDH7A1P49419 539 aaKnown RBP7.41□□□□□ -1.22
SPIDR-218ENST00000522222 SMTNP53814 917 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 ERVFC1P60507 584 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 PLCB3Q01970 1234 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 GRIK3Q13003 919 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 STRN3Q13033 797 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 PNOCQ13519 176 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 MORC3Q14149 939 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 COL19A1Q14993 1142 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 E2F4Q16254 413 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 MPZL3Q6UWV2 235 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 DYMQ7RTS9 669 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 APBB1IPQ7Z5R6 666 aaPredicted RBP7.41□□□□□ -1.22
SPIDR-218ENST00000522222 ZBTB33Q86T24 672 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 SFR1Q86XK3 245 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 COLGALT2Q8IYK4 626 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 MYCT1Q8N699 235 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 CEP120Q8N960 986 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 GSTCDQ8NEC7 633 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 SPATA20Q8TB22 786 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 UBXN4Q92575 508 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 DDX12PQ92771 950 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 HLA-CQ95604 372 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 DHX58Q96C10 678 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 TMEM169Q96HH4 297 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 IGSF21Q96ID5 467 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 PANX2Q96RD6 677 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 FIZ1Q96SL8 496 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 ACO2Q99798 780 aaKnown RBP7.41□□□□□ -1.22
SPIDR-218ENST00000522222 BAG1Q99933 345 aaPredicted RBP7.41□□□□□ -1.22
SPIDR-218ENST00000522222 TCF25Q9BQ70 676 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 TMEM175Q9BSA9 504 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 NTPCRQ9BSD7 190 aaKnown RBP7.41□□□□□ -1.22
SPIDR-218ENST00000522222 VN1R3Q9BXE9 311 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 CXCL16Q9H2A7 254 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 PTPRHQ9HD43 1115 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 ENTPD7Q9NQZ7 604 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 MARCH5Q9NX47 278 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 MIOSQ9NXC5 875 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 SNTG2Q9NY99 539 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 LARSQ9P2J5 1176 aaKnown RBP7.41□□□□□ -1.22
SPIDR-218ENST00000522222 KANSL3Q9P2N6 904 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 CACNG4Q9UBN1 327 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 PCDHB8Q9UN66 801 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 COG5Q9UP83 839 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 GDAQ9Y2T3 454 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 PRG3Q9Y2Y8 225 aaPredicted RBP7.41□□□□□ -1.22
SPIDR-218ENST00000522222 PCDHB13Q9Y5F0 798 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 PCDHA5Q9Y5H7 936 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.41□□□□□ -1.226e-8■■■■■ 33.5
SPIDR-218ENST00000522222 ITIH6Q6UXX5 1313 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 TTC28Q96AY4 2481 aa7.41□□□□□ -1.22
SPIDR-218ENST00000522222 CCDC66A2RUB6 948 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 CARNS1A5YM72 827 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 USP27XA6NNY8 438 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 HIDE1A8MVS5 230 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 H0YCG3 227 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 PTGESO14684 152 aa7.4□□□□□ -1.22
SPIDR-218ENST00000522222 HNRNPDLO14979 420 aaKnown RBP7.4□□□□□ -1.22
SPIDR-218ENST00000522222 LINC01565O15544 149 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms