RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ERP44Q9BS26 406 aa14.62□□□□□ -0.07
SYNPO-205ENST00000522122 DRC3Q9H069 523 aa14.62□□□□□ -0.07
SYNPO-205ENST00000522122 IL17RBQ9NRM6 502 aa14.62□□□□□ -0.07
SYNPO-205ENST00000522122 NAGPAQ9UK23 515 aa14.62□□□□□ -0.07
SYNPO-205ENST00000522122 M0QYV0 167 aa14.62□□□□□ -0.07
SYNPO-205ENST00000522122 IREB2P48200 963 aaKnown RBP14.62□□□□□ -0.07
SYNPO-205ENST00000522122 TMEM119Q4V9L6 283 aa14.62□□□□□ -0.07
SYNPO-205ENST00000522122 FSCBQ5H9T9 825 aa14.62□□□□□ -0.07
SYNPO-205ENST00000522122 ST13P4Q8IZP2 240 aaPredicted RBP14.62□□□□□ -0.07
SYNPO-205ENST00000522122 CRAMP1Q96RY5 1269 aa14.62□□□□□ -0.07
SYNPO-205ENST00000522122 VPS11Q9H270 941 aa14.62□□□□□ -0.07
SYNPO-205ENST00000522122 CXorf56Q9H5V9 222 aa14.62□□□□□ -0.07
SYNPO-205ENST00000522122 ALG6Q9Y672 507 aa14.62□□□□□ -0.07
SYNPO-205ENST00000522122 ARHGEF37A1IGU5 675 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 RCCD1A6NED2 376 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 TTC36A6NLP5 189 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 PON1P27169 355 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 HIF1AQ16665 826 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 LMBRD2Q68DH5 695 aaPredicted RBP14.61□□□□□ -0.07
SYNPO-205ENST00000522122 KLC3Q6P597 504 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 CELF4Q9BZC1 486 aaKnown RBP14.61□□□□□ -0.07
SYNPO-205ENST00000522122 PARP4Q9UKK3 1724 aaKnown RBP14.61□□□□□ -0.07
SYNPO-205ENST00000522122 CCT8L1PA6NM43 557 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 MYBL2P10244 700 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 DALRD3Q5D0E6 543 aaKnown RBP14.61□□□□□ -0.07
SYNPO-205ENST00000522122 PIP4K2CQ8TBX8 421 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 RNF139Q8WU17 664 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 FAM129AQ9BZQ8 928 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 UPF3AQ9H1J1 476 aaKnown RBP14.61□□□□□ -0.07
SYNPO-205ENST00000522122 CFAP69A5D8W1 941 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 RNF225M0QZC1 329 aaPredicted RBP14.61□□□□□ -0.07
SYNPO-205ENST00000522122 ZC2HC1CQ53FD0 456 aaPredicted RBP14.61□□□□□ -0.07
SYNPO-205ENST00000522122 C1orf146Q5VVC0 180 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 NUDCD3Q8IVD9 361 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 CNPY4Q8N129 248 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 KCNV2Q8TDN2 545 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 SKA2Q8WVK7 121 aaPredicted RBP14.61□□□□□ -0.07
SYNPO-205ENST00000522122 RAPGEF5Q92565 580 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 DHX38Q92620 1227 aaKnown RBP14.61□□□□□ -0.07
SYNPO-205ENST00000522122 TRABDQ9H4I3 376 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 CRYBG1Q9Y4K1 1723 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 KPNA7A9QM74 516 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 KIAA0391O15091 583 aaKnown RBP14.61□□□□□ -0.07
SYNPO-205ENST00000522122 CASP2P42575 452 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 OCRLQ01968 901 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 FAM102AQ5T9C2 384 aaPredicted RBP14.61□□□□□ -0.07
SYNPO-205ENST00000522122 PNMA5Q96PV4 448 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 RBM15Q96T37 977 aaKnown RBP eCLIP14.61□□□□□ -0.07
SYNPO-205ENST00000522122 AIPL1Q9NZN9 384 aa14.61□□□□□ -0.07
SYNPO-205ENST00000522122 GPR75-ASB3A0A0A6YYF3 556 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 WDR46O15213 610 aaKnown RBP14.6□□□□□ -0.07
SYNPO-205ENST00000522122 FGRP09769 529 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 KITP10721 976 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 NOP14P78316 857 aaKnown RBP14.6□□□□□ -0.07
SYNPO-205ENST00000522122 ROR1Q01973 937 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 ITIH4Q14624 930 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 RHPN2Q8IUC4 686 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 TSC22D3Q99576 134 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 GOLPH3Q9H4A6 298 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 DGAT1O75907 488 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 CYP11B2P19099 503 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 HNRNPH3P31942 346 aaKnown RBP14.6□□□□□ -0.07
SYNPO-205ENST00000522122 HEATR6Q6AI08 1181 aaKnown RBP14.6□□□□□ -0.07
SYNPO-205ENST00000522122 DSTYKQ6XUX3 929 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 TRIM67Q6ZTA4 783 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 COL23A1Q86Y22 540 aaPredicted RBP14.6□□□□□ -0.07
SYNPO-205ENST00000522122 ABI1Q8IZP0 508 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 TTC39CQ8N584 583 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 EIF1ADQ8N9N8 165 aaKnown RBP14.6□□□□□ -0.07
SYNPO-205ENST00000522122 LINC00116Q8NCU8 138 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 C9orf72Q96LT7 481 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 ROPN1BQ9BZX4 212 aaPredicted RBP14.6□□□□□ -0.07
SYNPO-205ENST00000522122 ROPN1Q9HAT0 212 aaPredicted RBP14.6□□□□□ -0.07
SYNPO-205ENST00000522122 GEMIN8Q9NWZ8 242 aaKnown RBP14.6□□□□□ -0.07
SYNPO-205ENST00000522122 PRR12Q9ULL5 1215 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 LOC102724159A0A0B4J2E5 919 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 SRRM3A6NNA2 597 aaPredicted RBP14.6□□□□□ -0.07
SYNPO-205ENST00000522122 WNT7AO00755 349 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 PFDN1O60925 122 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 CDH6P55285 790 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 PWP2Q15269 919 aaKnown RBP14.6□□□□□ -0.07
SYNPO-205ENST00000522122 MREGQ8N565 214 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 SLC13A1Q9BZW2 595 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 ACAD9Q9H845 621 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 PI4K2BG5E9Z4 385 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 FSBPO95073 299 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 FAM153BP0C7A2 387 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 ELF1P32519 619 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 SNRNP35Q16560 246 aaKnown RBP14.6□□□□□ -0.07
SYNPO-205ENST00000522122 FAM153CQ494X1 144 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 PRR5LQ6MZQ0 368 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 CDC42EP5Q6NZY7 148 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 CARD9Q9H257 536 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 FAM153AQ9UHL3 310 aa14.6□□□□□ -0.07
SYNPO-205ENST00000522122 DBR1Q9UK59 544 aaKnown RBP14.6□□□□□ -0.07
SYNPO-205ENST00000522122 ATXN2Q99700 1313 aaKnown RBP14.59□□□□□ -0.07
SYNPO-205ENST00000522122 COMTP21964 271 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 COPS2P61201 443 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 LONRF1Q17RB8 773 aa14.59□□□□□ -0.07
SYNPO-205ENST00000522122 CYB5D1Q6P9G0 228 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms