RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 BDP1A6H8Y1 2624 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 MYH9P35579 1960 aaKnown RBP6.66□□□□□ -1.34
SPIDR-216ENST00000521918 NCOR1O75376 2440 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 ABHD14A-ACY1A0A1B0GW23 586 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.66□□□□□ -1.34
SPIDR-216ENST00000521918 LCHNA4D1U4 455 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 EPOPA6NHQ4 379 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 WDR64B1ANS9 1081 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 HBP1O60381 514 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 GAS7O60861 476 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 EFCAB14O75071 495 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 STBD1O95210 358 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 GJB5O95377 273 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 C22orf31O95567 290 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 CA3P07451 260 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 GCFC2P16383 781 aaKnown RBP6.66□□□□□ -1.34
SPIDR-216ENST00000521918 JAK3P52333 1124 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 IGBP1P78318 339 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 MRPS6P82932 125 aaKnown RBP6.66□□□□□ -1.34
SPIDR-216ENST00000521918 HTRA4P83105 476 aaPredicted RBP6.66□□□□□ -1.34
SPIDR-216ENST00000521918 PRKCEQ02156 737 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 SPIRE1Q08AE8 756 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 FBXO47Q5MNV8 452 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 EXOSC6Q5RKV6 272 aaKnown RBP6.66□□□□□ -1.34
SPIDR-216ENST00000521918 LRCH2Q5VUJ6 765 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 FAM160B1Q5W0V3 765 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 SWSAP1Q6NVH7 229 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 MIS18BP1Q6P0N0 1132 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 MTHFD1LQ6UB35 978 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 PIK3AP1Q6ZUJ8 805 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 SPRED2Q7Z698 418 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 TMCO2Q7Z6W1 182 aaPredicted RBP6.66□□□□□ -1.34
SPIDR-216ENST00000521918 NEK8Q86SG6 692 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 CCDC83Q8IWF9 413 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 RDM1Q8NG50 284 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 GRIN3AQ8TCU5 1115 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 DNAJB3Q8WWF6 145 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 LINC01599Q8WXQ3 324 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 MYLIPQ8WY64 445 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 WASF1Q92558 559 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 WDR89Q96FK6 387 aaPredicted RBP6.66□□□□□ -1.34
SPIDR-216ENST00000521918 MEGF10Q96KG7 1140 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 TBC1D32Q96NH3 1257 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 CEP89Q96ST8 783 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 TEKT3Q9BXF9 490 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 FTOQ9C0B1 505 aaKnown RBP eCLIP6.66□□□□□ -1.34
SPIDR-216ENST00000521918 CCDC86Q9H6F5 360 aaKnown RBP6.66□□□□□ -1.34
SPIDR-216ENST00000521918 SUGCTQ9HAC7 445 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 RC3H2Q9HBD1 1191 aaKnown RBP6.66□□□□□ -1.34
SPIDR-216ENST00000521918 DISC1Q9NRI5 854 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 DDX25Q9UHL0 483 aaKnown RBP6.66□□□□□ -1.34
SPIDR-216ENST00000521918 LIMCH1Q9UPQ0 1083 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 PCDHA2Q9Y5H9 948 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 TTC3P53804 2025 aa6.66□□□□□ -1.34
SPIDR-216ENST00000521918 CCDC194A0A1B0GVG4 234 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 BTBD18B2RXH4 712 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 TBX3O15119 743 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 CHMP2AO43633 222 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 TIAF1O95411 115 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 RPLP2P05387 115 aaKnown RBP6.65□□□□□ -1.34
SPIDR-216ENST00000521918 GHRP10912 638 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 XBP1P17861 261 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 SFNP31947 248 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 KRT2P35908 639 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 KCNJ6P48051 423 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 TAP1Q03518 808 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 PPP2R5CQ13362 524 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 RABEP1Q15276 862 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 TARBP2Q15633 366 aaKnown RBP6.65□□□□□ -1.34
SPIDR-216ENST00000521918 TSNAXIP1Q2TAA8 658 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 LETM2Q2VYF4 491 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 ZNF484Q5JVG2 852 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 KRT40Q6A162 431 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.65□□□□□ -1.34
SPIDR-216ENST00000521918 TSHZ1Q6ZSZ6 1077 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 DIS3L2Q8IYB7 885 aaKnown RBP6.65□□□□□ -1.34
SPIDR-216ENST00000521918 KIAA0319LQ8IZA0 1049 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 TMEM87AQ8NBN3 555 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 TMEM40Q8WWA1 233 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 APBB2Q92870 758 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 FAM167AQ96KS9 214 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 UBL7Q96S82 380 aaPredicted RBP6.65□□□□□ -1.34
SPIDR-216ENST00000521918 LLPHQ9BRT6 129 aaKnown RBP6.65□□□□□ -1.34
SPIDR-216ENST00000521918 IFIH1Q9BYX4 1025 aaKnown RBP6.65□□□□□ -1.34
SPIDR-216ENST00000521918 FAM49AQ9H0Q0 323 aaPredicted RBP6.65□□□□□ -1.34
SPIDR-216ENST00000521918 PRDM12Q9H4Q4 367 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 AGO3Q9H9G7 860 aaKnown RBP6.65□□□□□ -1.34
SPIDR-216ENST00000521918 WRAP73Q9P2S5 460 aaPredicted RBP6.65□□□□□ -1.34
SPIDR-216ENST00000521918 GABBR1Q9UBS5 961 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 MSRAQ9UJ68 235 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 TRPV2Q9Y5S1 764 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 CDY2AQ9Y6F7 541 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 SQORQ9Y6N5 450 aa6.65□□□□□ -1.34
SPIDR-216ENST00000521918 LOXHD1Q8IVV2 1947 aa6.64□□□□□ -1.35
SPIDR-216ENST00000521918 EVPLQ92817 2033 aa6.64□□□□□ -1.35
SPIDR-216ENST00000521918 IGKV6-21A0A0C4DH24 114 aa6.64□□□□□ -1.35
SPIDR-216ENST00000521918 LINC01553A4QN01 128 aa6.64□□□□□ -1.35
SPIDR-216ENST00000521918 KIF28PB7ZC32 967 aa6.64□□□□□ -1.35
SPIDR-216ENST00000521918 CCNT1O60563 726 aaKnown RBP6.64□□□□□ -1.35
SPIDR-216ENST00000521918 LPXNO60711 386 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms