RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CNGA2Q16280 664 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 CSRP2Q16527 193 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 FLYWCH1Q4VC44 716 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 FAM209BQ5JX69 171 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 MFSD14BQ5SR56 506 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 DACT2Q5SW24 774 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 PRAMEF14Q5SWL7 426 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 C1orf228Q6PIY5 440 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 OTOP2Q7RTS6 562 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 ZDHHC14Q8IZN3 488 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 VPS37AQ8NEZ2 397 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 ZNF526Q8TF50 670 aaPredicted RBP4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 POF1BQ8WVV4 589 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 BRI3BPQ8WY22 251 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 GPHA2Q96T91 129 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 CRB3Q9BUF7 120 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 LRRC27Q9C0I9 530 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 MANSC1Q9H8J5 431 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 GPRC5BQ9NZH0 403 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 CPNE7Q9UBL6 633 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 ADAM29Q9UKF5 820 aa4.28□□□□□ -1.72
HMGN1P28-201ENST00000521340 PNPLA7Q6ZV29 1317 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 A0A1W2PPC4 97 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 RHPN2P1A8MT19 583 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 MATN2O00339 956 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 DDX3XO00571 662 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 PRAMEF4O60810 478 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 HMGCRP04035 888 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 FTH1P19P0C7X4 201 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 KITP10721 976 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 HDCP19113 662 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 CTSWP56202 376 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 SESN2P58004 480 aaPredicted RBP4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 NFYCQ13952 458 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 OTUD7BQ6GQQ9 843 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 HIBCHQ6NVY1 386 aaPredicted RBP4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 TRMT10BQ6PF06 316 aaKnown RBP4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 ADGRE4PQ86SQ3 457 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 PLXDC1Q8IUK5 500 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 REXO1L1PQ8IX06 675 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 IL17RDQ8NFM7 739 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 MYRIPQ8NFW9 859 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 WDR48Q8TAF3 677 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 CCHCR1Q8TD31 782 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 STON2Q8WXE9 905 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 NMD3Q96D46 503 aaKnown RBP4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 CEP95Q96GE4 821 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 TMX3Q96JJ7 454 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 HERPUD2Q9BSE4 406 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 C1orf43Q9BWL3 253 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 UNKQ9C0B0 810 aaKnown RBP4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 KIAA1683Q9H0B3 1180 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 WDCPQ9H6R7 721 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 PARD6AQ9NPB6 346 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 STARD7Q9NQZ5 370 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 LUZP4Q9P127 313 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 AJAP1Q9UKB5 411 aaPredicted RBP4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 PCDHA6Q9UN73 950 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 PCDHA1Q9Y5I3 950 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 ACTL7AQ9Y615 435 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 ZMYM3Q14202 1370 aa4.27□□□□□ -1.73
HMGN1P28-201ENST00000521340 A0A087WV62 115 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 FOXN3O00409 490 aaPredicted RBP4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 FFAR3O14843 346 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 MGEA5O60502 916 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 NBNO60934 754 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 GPR32O75388 356 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 TOX4O94842 621 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 AHSGP02765 367 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 RPLP2P05387 115 aaKnown RBP4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 VSIG10L2P0DP72 767 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 BMP7P18075 431 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 ABCB4P21439 1286 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 SUMO3P55854 103 aaPredicted RBP4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 ATP2C1P98194 919 aaPredicted RBP4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 SP140Q13342 867 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 DAG1Q14118 895 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 SSPNQ14714 243 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 FAM47AQ5JRC9 791 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 AGBL4Q5VU57 503 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 TMEM132EQ6IEE7 984 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 FAM180AQ6UWF9 173 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 MICU3Q86XE3 530 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 TP53I13Q8NBR0 393 aaPredicted RBP4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 KBTBD7Q8WVZ9 684 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 KCNC2Q96PR1 638 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 UIMC1Q96RL1 719 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 NELL2Q99435 816 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 MYOCQ99972 504 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 TTLL2Q9BWV7 592 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 OR10A2Q9H208 303 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 AGO3Q9H9G7 860 aaKnown RBP4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 KIAA1586Q9HCI6 787 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 LANCL2Q9NS86 450 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 SIDT1Q9NXL6 827 aaKnown RBP4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 FAM30AQ9NZY2 134 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 CNOT6Q9ULM6 557 aaKnown RBP4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 PADI4Q9UM07 663 aa4.26□□□□□ -1.73
HMGN1P28-201ENST00000521340 CORO2BQ9UQ03 480 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms