RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 KCNK12Q9HB15 430 aa17.66■□□□□ 0.42
IGHV3-42-201ENST00000520410 CDY1Q9Y6F8 540 aa17.66■□□□□ 0.42
IGHV3-42-201ENST00000520410 DENND4AQ7Z401 1863 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 H0YCG3 227 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 CLDN3O15551 220 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 CFHP08603 1231 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 HOXD11P31277 338 aaPredicted RBP17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 MCM4P33991 863 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 LIG4P49917 911 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 SLC12A3P55017 1021 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 KARSQ15046 597 aaKnown RBP17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 NAB2Q15742 525 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 TMEM119Q4V9L6 283 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 HYIQ5T013 277 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 GRASPQ7Z6J2 395 aaPredicted RBP17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 GPR65Q8IYL9 337 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 ST13P5Q8NFI4 369 aaPredicted RBP17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 SLC7A14Q8TBB6 771 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 RSAD2Q8WXG1 361 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 ZNF707Q96C28 371 aaPredicted RBP17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 KCND2Q9NZV8 630 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 FBXW11Q9UKB1 542 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 C2orf16Q68DN1 1984 aa17.65■□□□□ 0.42
IGHV3-42-201ENST00000520410 ADAM12O43184 909 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 XYLBO75191 536 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 TOM1L1O75674 476 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 PLCG1P19174 1290 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 PDCP20941 246 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 FSHRP23945 695 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 CEBPZQ03701 1054 aaKnown RBP17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 SOX4Q06945 474 aaPredicted RBP17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 MCM6Q14566 821 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 UPP1Q16831 310 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 ANKS3Q6ZW76 656 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 KCTD17Q8N5Z5 321 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 TMEM161BQ8NDZ6 487 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 SPIRE2Q8WWL2 714 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 C18orf25Q96B23 403 aaPredicted RBP17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 FAM212AQ96EL1 285 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 DDX27Q96GQ7 796 aaKnown RBP17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 MYADMQ96S97 322 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 REEP2Q9BRK0 252 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 FAM86C1Q9NVL1 165 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 IGSF9Q9P2J2 1179 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 TECTAO75443 2155 aa17.64■□□□□ 0.41
IGHV3-42-201ENST00000520410 TMEM189-UBE2V1I3L0A0 370 aa17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 HNRNPDLO14979 420 aaKnown RBP17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 NARSO43776 548 aaKnown RBP17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 N4BP1O75113 896 aaKnown RBP17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 MAPTP10636 758 aaKnown RBP17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 IGFBP6P24592 240 aaPredicted RBP17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 ELF1P32519 619 aa17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 LONP1P36776 959 aaKnown RBP17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 MRE11P49959 708 aa17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 NTHL1P78549 312 aa17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 SPAG1Q07617 926 aa17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 AXDND1Q5T1B0 1012 aaPredicted RBP17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 LILRA6Q6PI73 481 aa17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 HAUS6Q7Z4H7 955 aa17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 SIX5Q8N196 739 aa17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 C3orf58Q8NDZ4 430 aa17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 ATOH1Q92858 354 aaPredicted RBP17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 PTPRHQ9HD43 1115 aa17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 MTRRQ9UBK8 725 aa17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 DAXXQ9UER7 740 aaPredicted RBP17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 ODF2LQ9ULJ1 636 aa17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 DUSP12Q9UNI6 340 aa17.63■□□□□ 0.41
IGHV3-42-201ENST00000520410 PRRG1O14668 218 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 HNRNPA1P09651 372 aaKnown RBP eCLIP17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 CXCL8P10145 99 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 FGFR3P22607 806 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 MARCKSP29966 332 aaPredicted RBP17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 TXLNAP40222 546 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 GRIN1Q05586 938 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 PPP2R3AQ06190 1150 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 SPECC1Q5M775 1068 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 RAD54LQ92698 747 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 KIF12Q96FN5 646 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 ZMAT2Q96NC0 199 aaKnown RBP17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 PARVGQ9HBI0 331 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 CNTN3Q9P232 1028 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 CCDC39Q9UFE4 941 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 TUBGCP4Q9UGJ1 667 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 CA14Q9ULX7 337 aa17.62■□□□□ 0.41
IGHV3-42-201ENST00000520410 H0Y858 1186 aa17.61■□□□□ 0.41
IGHV3-42-201ENST00000520410 SLC26A4O43511 780 aa17.61■□□□□ 0.41
IGHV3-42-201ENST00000520410 LRG1P02750 347 aa17.61■□□□□ 0.41
IGHV3-42-201ENST00000520410 PROZP22891 400 aa17.61■□□□□ 0.41
IGHV3-42-201ENST00000520410 NCKAP1LP55160 1127 aa17.61■□□□□ 0.41
IGHV3-42-201ENST00000520410 ZPBP2Q6X784 338 aa17.61■□□□□ 0.41
IGHV3-42-201ENST00000520410 LARP4BQ92615 738 aaKnown RBP17.61■□□□□ 0.41
IGHV3-42-201ENST00000520410 CLIC4Q9Y696 253 aa17.61■□□□□ 0.41
IGHV3-42-201ENST00000520410 KMT2EQ8IZD2 1858 aa17.61■□□□□ 0.41
IGHV3-42-201ENST00000520410 H7C4K7 107 aa17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 TRAK2O60296 914 aa17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 C1RP00736 705 aa17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 CPB1P15086 417 aa17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 KCNE1P15382 129 aa17.6■□□□□ 0.41
IGHV3-42-201ENST00000520410 RAB33AQ14088 237 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms